C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: NADH dehydrogenase (ubiquinone) Fe-S protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000027111 Ndufs1-001 ENSMUSG00000025968 10090 - 1:63143596-63176822 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000027111
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000027111 18.057±0.74 32.347±4.60 23.842±2.13 35.093±14.55 97.923±12.44 31.345±3.99 27.987±13.68 84.882±20.87 42.236±4.13 40.486±8.83 9.548±1.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00039O CIL_00039O_0002 CGP 1:62958418-63176833
CIL_0001R4 CIL_0001R4_0002 CGP 1:63143596-63180486

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005739 IDA mitochondrion
GO:0005747 ISS mitochondrial respiratory chain complex I
GO:0005758 ISS mitochondrial intermembrane space
GO:0008137 IBA NADH dehydrogenase (ubiquinone) activity
GO:0008637 ISS apoptotic mitochondrial changes
GO:0009055 IEA electron carrier activity
GO:0042773 IEA ATP synthesis coupled electron transport
GO:0045333 ISS cellular respiration
GO:0046034 ISS ATP metabolic process
GO:0046872 IEA metal ion binding
GO:0051537 IEA 2 iron, 2 sulfur cluster binding
GO:0051539 IEA 4 iron, 4 sulfur cluster binding
GO:0051881 ISS regulation of mitochondrial membrane potential
GO:0072593 ISS reactive oxygen species metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000233190 NDUFS1-001 protein_coding Homo_sapiens 0 2985
ENST00000423725 NDUFS1-005 protein_coding Homo_sapiens 0 2726
ENST00000432169 NDUFS1-002 protein_coding Homo_sapiens 0 2492
ENST00000440274 NDUFS1-003 protein_coding Homo_sapiens 0 2582
ENST00000449699 NDUFS1-007 protein_coding Homo_sapiens 0 2918
ENST00000454195 NDUFS1-008 protein_coding Homo_sapiens 0 518
ENST00000455934 NDUFS1-201 protein_coding Homo_sapiens 0 2918
ENST00000456284 NDUFS1-009 nonsense_mediated_decay Homo_sapiens 0 355
ENST00000457011 NDUFS1-004 protein_coding Homo_sapiens 0 2492

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