C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tRNA aspartic acid methyltransferase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000028055 Trdmt1-003 ENSMUSG00000026723 10090 - 2:13511538-13544632 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonLiverMuscleOvaryPlacentaTestisENSMUST00000028055
Transcript ID Bladder Brain Colon Liver Muscle Ovary Placenta Testis
ENSMUST00000028055 2.625±0.43 0.951±0.00 0.463±0.00 1.489±0.48 0.567±0.07 1.830±0.68 2.119±1.10 1.985±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000IU CIL_0000IU_0003 CGP 2:13276338-13544664

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000354631 TRDMT1-006 nonsense_mediated_decay Homo_sapiens 0 725
ENST00000377799 TRDMT1-001 protein_coding Homo_sapiens 0 721
ENST00000424636 TRDMT1-008 nonsense_mediated_decay Homo_sapiens 0 255
ENST00000452380 TRDMT1-009 processed_transcript Homo_sapiens 0 725
ENST00000525762 TRDMT1-002 protein_coding Homo_sapiens 0 263

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