C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tRNA aspartic acid methyltransferase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000354631 TRDMT1-006 ENSG00000107614 9606 - 10:17142254-17201672 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000354631
Transcript ID Adipose Adrenal Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000354631 0.178±0.00 0.823±0.00 0.041±0.00 0.356±0.00 0.167±0.00 0.163±0.12 0.098±0.08 0.350±0.00 0.008±0.00 0.596±0.16 0.121±0.03 0.298±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000IU CIL_0000IU_0002 CGP 10:16823964-17202054
CIL_00046B CIL_00046B_0002 CGP 10:17142254-17237593

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008168 IEA methyltransferase activity
GO:0032259 IEA methylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000124488 Trdmt1-001 protein_coding Mus_musculus 0 918
ENSMUST00000028055 Trdmt1-003 processed_transcript Mus_musculus 0 725
ENSMUST00000144957 Trdmt1-002 processed_transcript Mus_musculus 0 206

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