C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: diphthamine biosynthesis 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000028640 Dph6-002 ENSMUSG00000057147 10090 - 2:114516416-114654953 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028640
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028640 1.781±0.60 8.450±3.18 1.052±0.00 2.325±0.60 1.690±0.56 0.985±0.34 2.275±1.05 1.142±0.41 2.905±0.42 0.298±0.05 7.679±3.66 1.930±0.11 0.583±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008IU CIL_0008IU_0002 VISTA 2:114111449-114713021
CIL_0006HH CIL_0006HH_0002 CGP 2:114193461-114654964
CIL_0007MM CIL_0007MM_0002 UCNEbase 2:114412124-116821493
CIL_0008V7 CIL_0008V7_0002 VISTA 2:114439395-115040295
CIL_0006HI CIL_0006HI_0002 CGP 2:114516416-115778768

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005524 IEA ATP binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0017178 IEA diphthine-ammonia ligase activity
GO:0017183 IEA peptidyl-diphthamide biosynthetic process from peptidyl-histidine

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000256538 DPH6-001 protein_coding Homo_sapiens 0 745
ENST00000558266 DPH6-009 protein_coding Homo_sapiens 0 255
ENST00000559784 DPH6-006 processed_transcript Homo_sapiens 2e-16 90
ENST00000561411 DPH6-004 protein_coding Homo_sapiens 0 556

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