C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: minichromosome maintenance deficient 8 (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000028831 Mcm8-001 ENSMUSG00000027353 10090 + 2:132816141-132843895 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028831
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028831 1.076±0.22 0.927±0.05 1.631±0.23 0.640±0.08 0.454±0.04 0.550±0.08 0.410±0.25 2.040±1.78 0.166±0.00 0.527±0.11 2.172±1.06 3.355±2.22 0.711±0.41

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002W4 CIL_0002W4_0002 CGP 2:132804207-132844197
CIL_0007A0 CIL_0007A0_0003 CGP 2:132816141-132866785

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000724 IMP double-strand break repair via homologous recombination
GO:0003674 ND molecular_function
GO:0003677 IEA DNA binding
GO:0004386 IEA helicase activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0006260 IEA DNA replication
GO:0006974 IMP cellular response to DNA damage stimulus
GO:0007049 IEA cell cycle
GO:0007292 IMP female gamete generation
GO:0048232 IMP male gamete generation
GO:0097362 IDA MCM8-MCM9 complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265187 MCM8-002 protein_coding Homo_sapiens 0 1661
ENST00000378883 MCM8-201 protein_coding Homo_sapiens 0 1351
ENST00000378886 MCM8-202 protein_coding Homo_sapiens 0 1500
ENST00000378896 MCM8-203 protein_coding Homo_sapiens 0 2750
ENST00000610722 MCM8-001 protein_coding Homo_sapiens 0 2750

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