C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002W4_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000089195-ENSG00000125885 CGP 9606 20:5937235-5995894
GeneTranscriptPositionBiotype
ENSG00000089195 (TRMT6)
tRNA methyltransferase 6 homolog (S. cerevisiae) 		ENST00000203001 (TRMT6-001) 5937833-5950536 protein_coding
ENST00000453074 (TRMT6-201) 5937833-5950558 protein_coding
ENST00000466974 (TRMT6-002) 5937833-5950477 processed_transcript
ENST00000473131 (TRMT6-003) 5937235-5950515 processed_transcript
ENST00000493972 (TRMT6-004) 5942675-5950514 processed_transcript
ENSG00000125885 (MCM8)
minichromosome maintenance complex component 8 		ENST00000265187 (MCM8-002) 5950931-5995206 protein_coding
ENST00000378883 (MCM8-201) 5950652-5995206 protein_coding
ENST00000378886 (MCM8-202) 5950652-5995206 protein_coding
ENST00000378896 (MCM8-203) 5950652-5995206 protein_coding
ENST00000610722 (MCM8-001) 5950652-5995894 protein_coding
ENSG00000231961 (RP5-967N21.7)
 ENST00000421490 (RP5-967N21.7-001) 5965180-5965511 processed_pseudogene
ENSG00000263473 (AL035461.1)
 ENST00000583129 (AL035461.1-201) 5992260-5992353 miRNA
ENSG00000278719 (MCM8-AS1)
MCM8 antisense RNA 1 		ENST00000613522 (MCM8-AS1-001) 5990943-6005821 antisense
CIL_0002W4_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000037376-ENSMUSG00000027353 CGP 10090 2:132804207-132844197
GeneTranscriptPositionBiotype
ENSMUSG00000027353 (Mcm8)
minichromosome maintenance deficient 8 (S. cerevisiae) 		ENSMUST00000028831 (Mcm8-001) 132816141-132843895 protein_coding
ENSMUST00000066559 (Mcm8-002) 132816141-132844197 protein_coding
ENSMUST00000135685 (Mcm8-003) 132816224-132818025 processed_transcript
ENSMUSG00000037376 (Trmt6)
tRNA methyltransferase 6 		ENSMUST00000039554 (Trmt6-001) 132804207-132816054 protein_coding
ENSMUST00000127855 (Trmt6-004) 132811767-132816013 processed_transcript
ENSMUST00000136897 (Trmt6-006) 132810442-132812507 processed_transcript
ENSMUST00000145117 (Trmt6-005) 132810417-132815758 processed_transcript
ENSMUST00000147336 (Trmt6-002) 132804207-132816055 processed_transcript
ENSMUST00000152836 (Trmt6-003) 132804207-132810635 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002W4_0001ENSG00000089195ENST00000203001ENST00000453074ENST00000466974ENST00000473131ENST00000493972ENSG00000125885ENST00000265187ENST00000378883ENST00000378886ENST00000378896ENST00000610722ENSG00000231961ENST00000421490ENSG00000263473ENST00000583129ENSG00000278719ENST00000613522CIL_0002W4_0002ENSMUSG00000027353ENSMUST00000028831ENSMUST00000066559ENSMUST00000135685ENSMUSG00000037376ENSMUST00000039554ENSMUST00000127855ENSMUST00000136897ENSMUST00000145117ENSMUST00000147336ENSMUST00000152836
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002W4_0001ENSG00000089195ENST00000203001ENST00000453074ENST00000466974ENST00000473131ENST00000493972ENSG00000125885ENST00000265187ENST00000378883ENST00000378886ENST00000378896ENST00000610722ENSG00000231961ENST00000421490ENSG00000263473ENST00000583129ENSG00000278719ENST00000613522CIL_0002W4_0002ENSMUSG00000027353ENSMUST00000028831ENSMUST00000066559ENSMUSG00000037376ENSMUST00000039554ENSMUST00000147336ENSMUST00000152836
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000089195 ENST00000203001 2.568±0.00 5.523±0.00 0.320±0.00 3.934±2.58 2.350±0.52 1.152±0.68 1.993±1.42 2.219±1.36 0.598±0.01 1.612±0.00 6.923±0.00 6.824±3.55 3.594±0.26 10.446±0.80
ENST00000453074 N/A N/A N/A N/A N/A N/A N/A 1.383±0.00 1.475±0.00 0.364±0.00 N/A N/A 0.561±0.00 N/A
ENST00000466974 N/A N/A 0.311±0.00 N/A N/A N/A N/A N/A N/A 0.084±0.00 N/A N/A N/A N/A
ENST00000473131 N/A N/A N/A 0.614±0.28 0.251±0.00 N/A N/A N/A 0.183±0.00 N/A N/A 0.445±0.00 N/A N/A
ENST00000493972 1.361±0.00 N/A 0.612±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000125885 ENST00000265187 0.383±0.00 N/A N/A N/A 0.330±0.00 0.405±0.00 0.471±0.00 0.518±0.06 0.271±0.00 N/A 0.415±0.00 2.711±3.04 N/A 4.481±2.90
ENST00000378883 N/A N/A N/A 0.088±0.00 N/A N/A N/A N/A 0.131±0.00 N/A N/A N/A N/A N/A
ENST00000378886 N/A N/A N/A 0.111±0.00 0.812±0.00 0.178±0.00 N/A 0.170±0.00 0.069±0.00 N/A N/A N/A 0.153±0.00 0.897±0.00
ENST00000378896 N/A N/A N/A 0.222±0.16 N/A 1.031±0.00 0.304±0.10 N/A N/A N/A 0.215±0.00 1.055±0.00 0.530±0.05 N/A
ENST00000610722 N/A 0.508±0.00 N/A 0.081±0.00 N/A N/A N/A N/A N/A N/A 0.288±0.02 2.117±1.57 0.982±0.00 2.905±1.41
ENSG00000231961 ENST00000421490 N/A N/A N/A N/A N/A 0.527±0.00 N/A N/A N/A N/A N/A 0.914±0.69 N/A 0.683±0.00
ENSG00000263473 ENST00000583129 N/A 0.637±0.00 N/A N/A N/A N/A 0.606±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000278719 ENST00000613522 N/A N/A 0.049±0.00 0.040±0.00 0.026±0.00 0.098±0.00 N/A 0.052±0.00 N/A N/A 0.114±0.00 N/A N/A 0.843±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027353 ENSMUST00000028831 1.076±0.22 N/A 0.927±0.05 1.631±0.23 0.640±0.08 0.454±0.04 0.550±0.08 0.410±0.25 2.040±1.78 0.166±0.00 0.527±0.11 2.172±1.06 3.355±2.22 0.711±0.41
ENSMUST00000066559 1.146±0.07 1.938±0.43 0.185±0.00 0.365±0.00 0.600±0.20 0.669±0.32 N/A 0.498±0.11 0.487±0.27 0.356±0.11 0.149±0.08 2.085±0.91 N/A 1.349±0.64
ENSMUST00000135685 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000037376 ENSMUST00000039554 2.530±0.95 1.168±0.30 4.197±1.18 3.796±2.02 1.518±0.49 1.153±0.45 0.973±0.05 2.178±0.57 3.932±3.16 1.325±0.27 2.341±0.71 2.014±1.46 7.240±2.43 1.956±0.31
ENSMUST00000127855 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136897 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145117 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147336 0.614±0.00 N/A 1.332±0.00 1.620±0.38 N/A 0.999±0.00 0.277±0.00 N/A N/A 0.301±0.02 0.350±0.00 1.550±0.79 0.808±0.00 0.786±0.20
ENSMUST00000152836 0.366±0.00 0.396±0.00 N/A N/A 0.341±0.08 0.268±0.04 N/A 0.225±0.00 N/A 0.244±0.01 N/A 0.401±0.05 N/A N/A

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