C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: minichromosome maintenance complex component 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000378886 MCM8-202 ENSG00000125885 9606 + 20:5950652-5995206 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonKidneyLiverPlacentaTestisENST00000378886
Transcript ID Brain Breast Colon Kidney Liver Placenta Testis
ENST00000378886 0.111±0.00 0.812±0.00 0.178±0.00 0.170±0.00 0.069±0.00 0.153±0.00 0.897±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002W4 CIL_0002W4_0001 CGP 20:5937235-5995894
CIL_0007A0 CIL_0007A0_0002 CGP 20:5950652-6040053

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000082 TAS G1/S transition of mitotic cell cycle
GO:0000278 TAS mitotic cell cycle
GO:0000724 IEA double-strand break repair via homologous recombination
GO:0003677 IEA DNA binding
GO:0004386 IEA helicase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0006260 TAS:IEA DNA replication
GO:0006271 TAS DNA strand elongation involved in DNA replication
GO:0006974 IDA cellular response to DNA damage stimulus
GO:0007292 ISS female gamete generation
GO:0015979 IEA photosynthesis
GO:0015995 IEA chlorophyll biosynthetic process
GO:0016851 IEA magnesium chelatase activity
GO:0016887 IEA ATPase activity
GO:0048232 ISS male gamete generation
GO:0097362 IDA MCM8-MCM9 complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000066559 Mcm8-002 protein_coding Mus_musculus 0 1500
ENSMUST00000028831 Mcm8-001 protein_coding Mus_musculus 0 1500
ENSMUST00000135685 Mcm8-003 processed_transcript Mus_musculus 4e-37 161

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