C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TPX2, microtubule-associated protein homolog (Xenopus laevis)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000028969 Tpx2-001 ENSMUSG00000027469 10090 + 2:152847995-152894654 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaENSMUST00000028969
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000028969 0.516±0.00 0.160±0.09 0.293±0.06 0.994±0.00 0.312±0.09 0.572±0.19 0.112±0.00 6.730±3.37 0.243±0.12 0.193±0.09 0.742±0.21 4.472±0.96

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008K5 CIL_0008K5_0002 VISTA 2:152434876-153035572
CIL_00089Z CIL_00089Z_0002 VISTA 2:152488201-153091382
CIL_0008N4 CIL_0008N4_0002 VISTA 2:152517372-153118197
CIL_0001A2 CIL_0001A2_0002 CGP 2:152780668-152895321
CIL_000319 CIL_000319_0003 CGP 2:152847964-152923068

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0005819 IDA spindle
GO:0005874 IEA microtubule
GO:0006915 IEA apoptotic process
GO:0007067 IEA mitotic nuclear division
GO:0019901 IPI protein kinase binding
GO:0032147 ISS activation of protein kinase activity
GO:0043203 IDA axon hillock
GO:0060236 IMP regulation of mitotic spindle organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000300403 TPX2-001 protein_coding Homo_sapiens 0 1951
ENST00000340513 TPX2-002 protein_coding Homo_sapiens 0 1232

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