C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TPX2, microtubule-associated
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000340513 TPX2-002 ENSG00000088325 9606 + 20:31739271-31801805 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryENST00000340513
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary
ENST00000340513 0.553±0.00 0.757±0.00 0.140±0.00 1.110±0.00 0.677±0.00 0.408±0.00 0.191±0.00 0.581±0.00 0.877±0.00 0.276±0.00 0.105±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008K5 CIL_0008K5_0001 VISTA 20:31303913-31904751
CIL_00089Z CIL_00089Z_0001 VISTA 20:31373735-31977079
CIL_0008N4 CIL_0008N4_0001 VISTA 20:31410024-32010895
CIL_0001A2 CIL_0001A2_0001 CGP 20:31664452-31801805
CIL_000319 CIL_000319_0002 CGP 20:31739271-31834689

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0005819 IEA spindle
GO:0005874 IEA microtubule
GO:0007067 IEA mitotic nuclear division

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000178997 Tpx2-202 protein_coding Mus_musculus 0 1232
ENSMUST00000164120 Tpx2-201 protein_coding Mus_musculus 0 1232
ENSMUST00000028969 Tpx2-001 protein_coding Mus_musculus 0 1232
ENSMUST00000109816 Tpx2-002 protein_coding Mus_musculus 0 1232
ENSMUST00000120731 Gm12479-001 processed_pseudogene Mus_musculus 0 798

Loading