C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TPX2, microtubule-associated
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000300403 TPX2-001 ENSG00000088325 9606 + 20:31739271-31801805 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000300403
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000300403 0.259±0.00 0.191±0.00 0.067±0.00 0.572±0.06 2.503±0.00 3.395±0.00 0.035±0.00 0.031±0.00 0.269±0.22 0.327±0.00 0.268±0.00 15.240±12.57 5.379±1.74 21.570±1.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008K5 CIL_0008K5_0001 VISTA 20:31303913-31904751
CIL_00089Z CIL_00089Z_0001 VISTA 20:31373735-31977079
CIL_0008N4 CIL_0008N4_0001 VISTA 20:31410024-32010895
CIL_0001A2 CIL_0001A2_0001 CGP 20:31664452-31801805
CIL_000319 CIL_000319_0002 CGP 20:31739271-31834689

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000922 IDA spindle pole
GO:0005515 IPI protein binding
GO:0005524 TAS ATP binding
GO:0005525 TAS GTP binding
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0005819 ISS spindle
GO:0005874 IEA microtubule
GO:0006915 IEA apoptotic process
GO:0007067 IEA mitotic nuclear division
GO:0008283 TAS cell proliferation
GO:0015630 IDA microtubule cytoskeleton
GO:0019901 IPI protein kinase binding
GO:0032147 IDA activation of protein kinase activity
GO:0043203 IEA axon hillock
GO:0060236 ISS regulation of mitotic spindle organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000178997 Tpx2-202 protein_coding Mus_musculus 0 1951
ENSMUST00000164120 Tpx2-201 protein_coding Mus_musculus 0 1951
ENSMUST00000028969 Tpx2-001 protein_coding Mus_musculus 0 1951
ENSMUST00000109816 Tpx2-002 protein_coding Mus_musculus 0 1951
ENSMUST00000120731 Gm12479-001 processed_pseudogene Mus_musculus 0 1103

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