C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein phosphatase 1 (formerly 2C)-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000029355 Ppm1l-001 ENSMUSG00000027784 10090 + 3:69316861-69560802 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000029355
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000029355 3.262±1.86 2.763±0.31 3.741±0.46 7.044±1.30 2.232±0.77 1.876±0.21 3.686±0.70 2.185±0.24 1.753±0.54 2.890±0.55 12.498±1.33 4.403±0.71 0.640±0.30 0.719±0.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004K2 CIL_0004K2_0003 CGP 3:69222419-69560802
CIL_0001Z8 CIL_0001Z8_0002 CGP 3:69316861-69598861

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000165 IPI MAPK cascade
GO:0004722 IDA protein serine/threonine phosphatase activity
GO:0005515 IPI protein binding
GO:0006470 IEA protein dephosphorylation
GO:0007178 IDA transmembrane receptor protein serine/threonine kinase signaling pathway
GO:0016021 IEA integral component of membrane
GO:0046872 IEA metal ion binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000295839 PPM1L-004 protein_coding Homo_sapiens 0 952
ENST00000464260 PPM1L-005 protein_coding Homo_sapiens 0 955
ENST00000480117 PPM1L-003 processed_transcript Homo_sapiens 0 750
ENST00000497343 PPM1L-002 protein_coding Homo_sapiens 0 867
ENST00000498165 PPM1L-001 protein_coding Homo_sapiens 0 1611

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