C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: WW domain containing transcription regulator 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000029380 Wwtr1-001 ENSMUSG00000027803 10090 - 3:57455649-57575828 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000029380
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000029380 41.851±7.57 29.966±4.88 30.841±0.57 5.478±3.77 27.350±9.93 15.169±0.85 16.835±1.72 19.584±2.52 3.096±1.17 50.930±7.01 4.964±0.55 42.308±17.47 17.283±12.00 2.517±1.90

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002R1 CIL_0002R1_0002 CGP 3:57425314-57575910
CIL_0002R8 CIL_0002R8_0002 CGP 3:57455649-57651715

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IGI negative regulation of transcription from RNA polymerase II promoter
GO:0001649 IGI osteoblast differentiation
GO:0003713 IDA transcription coactivator activity
GO:0003714 IGI transcription corepressor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005667 IDA transcription factor complex
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IDA regulation of transcription, DNA-templated
GO:0016567 IDA protein ubiquitination
GO:0031146 IMP SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0032835 IMP glomerulus development
GO:0035264 IMP multicellular organism growth
GO:0042803 IDA protein homodimerization activity
GO:0045599 IGI negative regulation of fat cell differentiation
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0048762 IMP mesenchymal cell differentiation
GO:0060271 IMP cilium morphogenesis
GO:0060828 IGI regulation of canonical Wnt signaling pathway
GO:0060993 IMP kidney morphogenesis
GO:0072307 IGI regulation of metanephric nephron tubule epithelial cell differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000360632 WWTR1-004 protein_coding Homo_sapiens 0 1607
ENST00000465804 WWTR1-001 protein_coding Homo_sapiens 0 1650
ENST00000467467 WWTR1-003 protein_coding Homo_sapiens 0 1482
ENST00000471586 WWTR1-012 nonsense_mediated_decay Homo_sapiens 0 496
ENST00000472417 WWTR1-010 protein_coding Homo_sapiens 0 819
ENST00000475579 WWTR1-006 protein_coding Homo_sapiens 0 427
ENST00000479238 WWTR1-009 protein_coding Homo_sapiens 0 734
ENST00000485244 WWTR1-011 retained_intron Homo_sapiens 0 394
ENST00000485352 WWTR1-008 protein_coding Homo_sapiens 0 542
ENST00000494754 WWTR1-013 nonsense_mediated_decay Homo_sapiens 0 481

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