C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation initiation factor 2A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000029387 Eif2a-001 ENSMUSG00000027810 10090 + 3:58525821-58557501 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartLiverMusclePlacentaENSMUST00000029387
Transcript ID Adipose Bladder Brain Breast Heart Liver Muscle Placenta
ENSMUST00000029387 5.083±0.15 18.698±0.18 12.724±0.57 8.745±0.00 5.005±1.30 22.498±5.00 12.767±1.10 18.759±6.41

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002QY CIL_0002QY_0002 CGP 3:58415689-58525873
CIL_0004SR CIL_0004SR_0003 CGP 3:58521969-58557501
CIL_0002IA CIL_0002IA_0002 CGP 3:58525821-58593133

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000049 ISS tRNA binding
GO:0003743 ISS translation initiation factor activity
GO:0005515 IEA protein binding
GO:0005615 IEA extracellular space
GO:0005737 ISS cytoplasm
GO:0005850 ISS eukaryotic translation initiation factor 2 complex
GO:0006412 IDA translation
GO:0006413 IEA translational initiation
GO:0006417 ISS regulation of translation
GO:0006468 IDA protein phosphorylation
GO:0009967 IDA positive regulation of signal transduction
GO:0032933 IDA SREBP signaling pathway
GO:0042255 ISS ribosome assembly
GO:0043022 ISS ribosome binding
GO:0072562 IEA blood microparticle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000273435 EIF2A-004 protein_coding Homo_sapiens 0 2231
ENST00000406576 EIF2A-003 protein_coding Homo_sapiens 0 1639
ENST00000460851 EIF2A-001 protein_coding Homo_sapiens 0 2385
ENST00000462221 EIF2A-013 nonsense_mediated_decay Homo_sapiens 0 736
ENST00000463863 EIF2A-006 retained_intron Homo_sapiens 0 316
ENST00000465535 EIF2A-015 protein_coding Homo_sapiens 0 1118
ENST00000469331 EIF2A-011 retained_intron Homo_sapiens 0 403
ENST00000472926 EIF2A-014 retained_intron Homo_sapiens 0 313
ENST00000473499 EIF2A-007 retained_intron Homo_sapiens 0 200
ENST00000474505 EIF2A-009 retained_intron Homo_sapiens 0 660
ENST00000477551 EIF2A-005 nonsense_mediated_decay Homo_sapiens 0 1478
ENST00000482093 EIF2A-010 protein_coding Homo_sapiens 0 656
ENST00000487799 EIF2A-002 protein_coding Homo_sapiens 0 1984
ENST00000490505 EIF2A-012 nonsense_mediated_decay Homo_sapiens 0 499
ENST00000494558 EIF2A-008 nonsense_mediated_decay Homo_sapiens 0 645

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