C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000228_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000043757-ENSDARG00000002523 CGP 7955 10:11105114-11246479
GeneTranscriptPositionBiotype
ENSDARG00000002523 (hsdl2)
hydroxysteroid dehydrogenase like 2 		ENSDART00000038888 (hsdl2-201) 11231166-11246458 protein_coding
ENSDART00000155333 (hsdl2-002) 11227472-11242719 protein_coding
ENSDART00000155742 (hsdl2-001) 11226066-11246479 protein_coding
ENSDARG00000043757 (ptbp3)
polypyrimidine tract binding protein 3 		ENSDART00000040308 (ptbp3-201) 11105114-11169009 protein_coding
ENSDART00000146727 (ptbp3-001) 11112217-11227461 protein_coding
CIL_000228_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000119314-ENSG00000119471 CGP 9606 9:112217716-112472410
GeneTranscriptPositionBiotype
ENSG00000119471 (HSDL2)
hydroxysteroid dehydrogenase like 2 		ENST00000398803 (HSDL2-001) 112380080-112472405 protein_coding
ENST00000398805 (HSDL2-002) 112379937-112472410 protein_coding
ENST00000467434 (HSDL2-004) 112380122-112459537 processed_transcript
ENST00000480881 (HSDL2-003) 112414002-112441770 processed_transcript
ENST00000488101 (HSDL2-005) 112380104-112454162 processed_transcript
ENSG00000213529 (RP11-432F4.2)
 ENST00000448036 (RP11-432F4.2-001) 112362714-112363116 processed_pseudogene
ENSG00000230081 (HSPE1P28)
heat shock 10kDa protein 1 pseudogene 28 		ENST00000443139 (HSPE1P28-001) 112280978-112281335 processed_pseudogene
ENSG00000242256 (RN7SL57P)
RNA, 7SL, cytoplasmic 57, pseudogene 		ENST00000493687 (RN7SL57P-201) 112242550-112242839 misc_RNA
ENSG00000243911 (RN7SL430P)
RNA, 7SL, cytoplasmic 430, pseudogene 		ENST00000464176 (RN7SL430P-201) 112272596-112272837 misc_RNA
CIL_000228_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000028382-ENSMUSG00000028383 CGP 10090 4:59471868-59618689
GeneTranscriptPositionBiotype
ENSMUSG00000028382 (Ptbp3)
polypyrimidine tract binding protein 3 		ENSMUST00000030076 (Ptbp3-001) 59471868-59549364 protein_coding
ENSMUST00000102883 (Ptbp3-002) 59475259-59549284 protein_coding
ENSMUST00000134879 (Ptbp3-003) 59493189-59549257 nonsense_mediated_decay
ENSMUST00000140925 (Ptbp3-005) 59517473-59548737 protein_coding
ENSMUST00000148331 (Ptbp3-006) 59476648-59549314 protein_coding
ENSMUST00000151313 (Ptbp3-004) 59501103-59514348 retained_intron
ENSMUST00000172471 (Ptbp3-013) 59481443-59493285 protein_coding
ENSMUST00000172768 (Ptbp3-010) 59476583-59548775 protein_coding
ENSMUST00000173268 (Ptbp3-012) 59476935-59485772 retained_intron
ENSMUST00000173699 (Ptbp3-008) 59475711-59549243 protein_coding
ENSMUST00000173884 (Ptbp3-011) 59493239-59549265 protein_coding
ENSMUST00000174586 (Ptbp3-009) 59472048-59549295 protein_coding
ENSMUST00000174748 (Ptbp3-007) 59481448-59549252 nonsense_mediated_decay
ENSMUSG00000028383 (Hsdl2)
hydroxysteroid dehydrogenase like 2 		ENSMUST00000030078 (Hsdl2-001) 59581563-59618689 protein_coding
ENSMUST00000107528 (Hsdl2-002) 59581645-59618688 protein_coding
ENSMUST00000128792 (Hsdl2-003) 59594310-59601476 protein_coding
ENSMUSG00000080831 (Gm12529)
predicted gene 12529 		ENSMUST00000119529 (Gm12529-001) 59532747-59533014 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000228_0001ENSDARG00000002523ENSDART00000038888ENSDART00000155333ENSDART00000155742ENSDARG00000043757ENSDART00000040308ENSDART00000146727CIL_000228_0002ENSG00000119471ENST00000398803ENST00000398805ENST00000467434ENST00000480881ENST00000488101ENSG00000213529ENST00000448036ENSG00000230081ENST00000443139ENSG00000242256ENST00000493687ENSG00000243911ENST00000464176CIL_000228_0003ENSMUSG00000028382ENSMUST00000030076ENSMUST00000102883ENSMUST00000134879ENSMUST00000140925ENSMUST00000148331ENSMUST00000151313ENSMUST00000172471ENSMUST00000172768ENSMUST00000173268ENSMUST00000173699ENSMUST00000173884ENSMUST00000174586ENSMUST00000174748ENSMUSG00000028383ENSMUST00000030078ENSMUST00000107528ENSMUST00000128792ENSMUSG00000080831ENSMUST00000119529
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000228_0001ENSDARG00000002523ENSDART00000038888ENSDARG00000043757ENSDART00000040308CIL_000228_0002ENSG00000119471ENST00000398803ENST00000398805ENST00000467434ENSG00000213529ENST00000448036ENSG00000230081ENST00000443139ENSG00000242256ENST00000493687ENSG00000243911ENST00000464176CIL_000228_0003ENSMUSG00000028382ENSMUST00000030076ENSMUST00000102883ENSMUST00000148331ENSMUST00000172768ENSMUST00000174586ENSMUST00000174748ENSMUSG00000028383ENSMUST00000030078ENSMUST00000107528ENSMUST00000128792ENSMUSG00000080831ENSMUST00000119529
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000002523 ENSDART00000038888 N/A N/A N/A 19.679±0.72 N/A N/A 92.910±13.96 51.563±0.00 6.829±0.00 N/A 27.946±0.00 N/A N/A N/A
ENSDART00000155333 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000155742 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000043757 ENSDART00000040308 N/A N/A N/A 3.234±0.51 N/A N/A 4.729±0.00 1.707±0.25 N/A N/A 1.764±0.00 N/A N/A N/A
ENSDART00000146727 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000119471 ENST00000398803 3.306±0.00 1.770±0.00 N/A 1.623±0.00 N/A 5.755±0.00 8.783±0.00 4.536±0.00 9.005±0.00 2.354±0.45 3.510±0.00 6.502±3.42 N/A 4.493±0.00
ENST00000398805 15.470±0.00 4.412±0.00 7.437±0.00 7.641±5.44 16.153±9.31 4.665±3.26 29.752±12.05 14.730±1.27 9.316±4.83 4.870±1.43 12.953±7.07 15.030±3.32 5.462±0.61 7.431±1.46
ENST00000467434 N/A N/A N/A N/A N/A 4.316±0.00 N/A N/A N/A 5.354±0.00 N/A N/A N/A N/A
ENST00000480881 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488101 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000213529 ENST00000448036 0.037±0.00 0.237±0.00 N/A 0.041±0.00 0.492±0.45 N/A 0.107±0.00 N/A N/A 0.038±0.00 0.103±0.00 0.066±0.00 N/A 0.307±0.24
ENSG00000230081 ENST00000443139 N/A N/A N/A N/A N/A 1.672±0.00 N/A 0.384±0.27 N/A N/A N/A 0.725±0.00 0.093±0.00 N/A
ENSG00000242256 ENST00000493687 N/A 0.117±0.00 N/A N/A 0.122±0.00 0.559±0.00 N/A N/A 1.643±0.00 N/A N/A 0.732±0.40 N/A 0.053±0.00
ENSG00000243911 ENST00000464176 N/A 0.084±0.00 N/A N/A N/A 6.170±0.00 0.322±0.00 N/A 0.629±0.00 1.787±0.00 N/A 1.403±1.16 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028382 ENSMUST00000030076 7.918±1.98 3.353±0.00 6.923±1.26 3.037±1.74 7.960±2.22 6.196±2.50 2.362±0.46 7.365±2.68 8.309±4.15 9.730±2.35 0.535±0.25 5.604±2.40 25.123±9.26 1.173±0.58
ENSMUST00000102883 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.333±0.00 N/A N/A
ENSMUST00000134879 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140925 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148331 N/A 10.033±4.01 N/A N/A N/A 4.120±0.00 N/A N/A N/A N/A N/A N/A 29.361±0.00 N/A
ENSMUST00000151313 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172471 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172768 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.125±0.00
ENSMUST00000173268 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173699 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173884 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174586 6.733±1.80 6.483±1.65 4.119±0.04 1.690±0.09 6.038±1.92 9.609±1.75 1.651±0.44 3.888±2.25 7.400±4.61 8.924±2.63 0.521±0.15 12.913±4.36 19.660±2.46 1.038±0.28
ENSMUST00000174748 9.194±1.36 15.125±3.92 N/A N/A 15.994±3.15 20.616±6.02 2.390±0.00 7.981±2.13 5.652±0.59 12.091±2.01 N/A 20.063±4.58 N/A 3.358±0.26
ENSMUSG00000028383 ENSMUST00000030078 26.688±8.97 16.148±1.13 29.399±3.80 6.967±2.15 17.789±2.46 8.160±1.85 43.994±2.68 15.872±2.02 19.669±7.18 10.078±1.02 16.499±2.57 14.598±5.06 8.298±1.86 31.893±2.09
ENSMUST00000107528 N/A N/A N/A N/A N/A N/A 8.735±1.58 N/A N/A N/A 2.684±0.74 N/A N/A N/A
ENSMUST00000128792 N/A N/A N/A N/A 27.440±12.42 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000080831 ENSMUST00000119529 0.490±0.02 1.852±0.00 N/A N/A 0.875±0.39 N/A 0.345±0.00 0.366±0.01 1.160±0.47 1.188±0.17 N/A 3.134±0.10 0.998±0.40 0.711±0.00

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