C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mesoderm induction early response 1 homolog (Xenopus laevis
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000030247 Mier1-201 ENSMUSG00000028522 10090 + 4:103115560-103165749 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverLungMuscleOvaryENSMUST00000030247
Transcript ID Brain Heart Kidney Liver Lung Muscle Ovary
ENSMUST00000030247 5.232±0.75 0.695±0.00 1.309±0.00 1.701±0.82 3.121±0.00 0.865±0.36 4.389±1.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000260 CIL_000260_0002 CGP 4:103017872-103114555
CIL_000261 CIL_000261_0002 CGP 4:103038065-103165754
CIL_00069G CIL_00069G_0002 CGP 4:103114390-103215164

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0006351 IEA transcription, DNA-templated
GO:0017053 ISS transcriptional repressor complex
GO:0031937 ISS positive regulation of chromatin silencing

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000355356 MIER1-002 protein_coding Homo_sapiens 0 2220
ENST00000355977 MIER1-201 protein_coding Homo_sapiens 0 1387
ENST00000357692 MIER1-001 protein_coding Homo_sapiens 0 2523
ENST00000371012 MIER1-003 protein_coding Homo_sapiens 0 549
ENST00000371014 MIER1-008 protein_coding Homo_sapiens 0 1648
ENST00000371016 MIER1-006 protein_coding Homo_sapiens 0 1934
ENST00000371018 MIER1-202 protein_coding Homo_sapiens 0 2017
ENST00000401041 MIER1-009 protein_coding Homo_sapiens 0 2218
ENST00000401042 MIER1-007 protein_coding Homo_sapiens 0 1650
ENST00000479067 MIER1-004 processed_transcript Homo_sapiens 0 732
ENST00000493357 MIER1-005 processed_transcript Homo_sapiens 0 219

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