C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mesoderm induction early response 1, transcriptional regulator
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000401041 MIER1-009 ENSG00000198160 9606 + 1:66924959-66985684 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartLiverLungOvaryENST00000401041
Transcript ID Bladder Brain Breast Colon Heart Liver Lung Ovary
ENST00000401041 1.790±0.00 2.179±0.00 2.817±0.00 4.794±0.00 0.530±0.00 3.004±0.00 4.083±0.00 3.442±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000261 CIL_000261_0001 CGP 1:66812885-66988619
CIL_00069G CIL_00069G_0001 CGP 1:66924895-67054099

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0004871 IMP signal transducer activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0007165 IMP signal transduction
GO:0017053 IDA transcriptional repressor complex
GO:0031937 IDA positive regulation of chromatin silencing
GO:0043123 IMP positive regulation of I-kappaB kinase/NF-kappaB signaling

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030247 Mier1-201 protein_coding Mus_musculus 0 2218
ENSMUST00000106857 Mier1-009 protein_coding Mus_musculus 0 2218
ENSMUST00000106858 Mier1-001 protein_coding Mus_musculus 0 2218
ENSMUST00000097945 Mier1-013 protein_coding Mus_musculus 0 2182
ENSMUST00000106855 Mier1-003 protein_coding Mus_musculus 0 1308
ENSMUST00000124348 Mier1-012 retained_intron Mus_musculus 0 865
ENSMUST00000149259 Mier1-002 processed_transcript Mus_musculus 0 841
ENSMUST00000151588 Mier1-010 retained_intron Mus_musculus 0 765
ENSMUST00000128536 Mier1-004 processed_transcript Mus_musculus 0 662
ENSMUST00000136092 Mier1-014 processed_transcript Mus_musculus 0 331
ENSMUST00000137348 Mier1-008 processed_transcript Mus_musculus 0 285
ENSMUST00000134533 Mier1-007 protein_coding Mus_musculus 2.00386e-43 182
ENSMUST00000144219 Mier1-005 processed_transcript Mus_musculus 2.00386e-43 182
ENSMUST00000143417 Mier1-006 protein_coding Mus_musculus 2.00386e-43 182
ENSMUST00000106868 Wdr78-005 protein_coding Mus_musculus 1e-36 159

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