C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mesoderm induction early response 1, transcriptional regulator
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000355356 MIER1-002 ENSG00000198160 9606 + 1:66930243-66988030 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000355356
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000355356 8.676±0.00 7.559±0.00 0.997±0.00 3.778±2.08 3.844±2.78 9.674±1.15 1.455±1.11 7.457±0.00 3.673±1.53 7.193±2.69 2.070±1.98 4.477±2.39 3.828±1.54 9.985±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000261 CIL_000261_0001 CGP 1:66812885-66988619
CIL_00069G CIL_00069G_0001 CGP 1:66924895-67054099

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0004871 IMP signal transducer activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0007165 IMP signal transduction
GO:0017053 IDA transcriptional repressor complex
GO:0031937 IDA positive regulation of chromatin silencing
GO:0043123 IMP positive regulation of I-kappaB kinase/NF-kappaB signaling

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000106857 Mier1-009 protein_coding Mus_musculus 0 2270
ENSMUST00000030247 Mier1-201 protein_coding Mus_musculus 0 2220
ENSMUST00000106858 Mier1-001 protein_coding Mus_musculus 0 2220
ENSMUST00000097945 Mier1-013 protein_coding Mus_musculus 0 2182
ENSMUST00000106855 Mier1-003 protein_coding Mus_musculus 0 1308
ENSMUST00000124348 Mier1-012 retained_intron Mus_musculus 0 905
ENSMUST00000149259 Mier1-002 processed_transcript Mus_musculus 0 843
ENSMUST00000151588 Mier1-010 retained_intron Mus_musculus 0 809
ENSMUST00000128536 Mier1-004 processed_transcript Mus_musculus 0 662

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