C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: BEN domain containing 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000371833 BEND5-001 ENSG00000162373 9606 - 1:48727523-48776918 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000371833
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000371833 0.384±0.00 0.983±0.00 0.357±0.00 1.767±0.16 0.169±0.00 1.117±0.00 0.168±0.08 0.723±0.00 0.195±0.00 0.260±0.00 0.175±0.00 1.660±1.07 0.290±0.15 1.389±0.44

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000633 CIL_000633_0002 CGP 1:48295372-50023913
CIL_0008UZ CIL_0008UZ_0001 VISTA 1:48347085-48947691
CIL_000632 CIL_000632_0002 CGP 1:48532855-50023913
CIL_000631 CIL_000631_0002 CGP 1:48727523-50203786

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005794 IEA Golgi apparatus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030274 Bend5-001 protein_coding Mus_musculus 0 2074
ENSMUST00000129760 Bend5-002 processed_transcript Mus_musculus 0 1397
ENSMUST00000123667 Bend5-005 processed_transcript Mus_musculus 0 597
ENSMUST00000139876 Bend5-003 protein_coding Mus_musculus 0 503
ENSMUST00000130523 Bend5-004 processed_transcript Mus_musculus 0 429
ENSMUST00000138394 Bend5-006 processed_transcript Mus_musculus 0 309

Loading