C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin-conjugating enzyme E2K
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000031105 Ube2k-004 ENSMUSG00000029203 10090 + 5:65537352-65595047 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000031105
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000031105 9.887±0.59 3.629±0.00 19.803±0.00 47.073±0.00 9.775±3.46 6.952±1.93 10.721±1.49 9.190±2.33 11.035±1.55 29.719±16.81 60.756±32.72 260.527±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002TW CIL_0002TW_0003 CGP 5:65446844-65598988
CIL_0002TZ CIL_0002TZ_0003 CGP 5:65537233-65697856

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 TAS ubiquitin-protein transferase activity
GO:0016567 TAS protein ubiquitination
GO:0016881 IEA acid-amino acid ligase activity
GO:0032434 IDA regulation of proteasomal ubiquitin-dependent protein catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261427 UBE2K-001 protein_coding Homo_sapiens 0 684
ENST00000438068 UBE2K-002 processed_transcript Homo_sapiens 0 684
ENST00000445950 UBE2K-006 protein_coding Homo_sapiens 0 475
ENST00000503368 UBE2K-005 protein_coding Homo_sapiens 0 682
ENST00000510719 UBE2K-007 nonsense_mediated_decay Homo_sapiens 0 532
ENST00000510934 UBE2K-004 protein_coding Homo_sapiens 0 475
ENST00000513231 UBE2K-003 processed_transcript Homo_sapiens 0 684

Loading