C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin-conjugating enzyme E2K
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000261427 UBE2K-001 ENSG00000078140 9606 + 4:39698044-39782792 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000261427
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000261427 7.604±0.00 9.455±0.00 3.105±0.00 14.349±3.13 8.032±1.97 5.935±1.95 4.026±1.54 10.341±2.52 6.539±0.44 0.646±0.00 7.300±0.00 6.909±2.13 7.265±2.30 6.343±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002TW CIL_0002TW_0002 CGP 4:39546330-39782792
CIL_0002TZ CIL_0002TZ_0002 CGP 4:39698044-39977956

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005515 IPI:IEA protein binding
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0006511 TAS ubiquitin-dependent protein catabolic process
GO:0016881 IEA acid-amino acid ligase activity
GO:0031625 IPI ubiquitin protein ligase binding
GO:0032434 IEA regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0034450 IDA ubiquitin-ubiquitin ligase activity
GO:0070059 IEA intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress
GO:0070062 IDA extracellular vesicular exosome
GO:0070936 IDA protein K48-linked ubiquitination

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000142407 Ube2k-001 protein_coding Mus_musculus 0 1930
ENSMUST00000131873 Ube2k-002 processed_transcript Mus_musculus 0 1480
ENSMUST00000122141 Ube2k-003 protein_coding Mus_musculus 0 880
ENSMUST00000146799 Ube2k-005 retained_intron Mus_musculus 0 695
ENSMUST00000031105 Ube2k-004 nonsense_mediated_decay Mus_musculus 0 684

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