C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: 4-hydroxyphenylpyruvate dioxygenase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000289004 HPD-002 ENSG00000158104 9606 - 12:121839527-121858859 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000289004
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000289004 0.021±0.00 1.371±0.00 35.589±0.00 0.736±0.58 1.437±0.56 0.624±0.00 0.103±0.00 241.574±179.18 367.023±366.67 0.323±0.00 0.424±0.00 1.404±1.64 0.810±0.61 3.409±0.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002ZI CIL_0002ZI_0001 CGP 12:121804180-121863596
CIL_0002ZH CIL_0002ZH_0001 CGP 12:121839527-121918297

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 IEA Golgi membrane
GO:0003868 IEA 4-hydroxyphenylpyruvate dioxygenase activity
GO:0005783 IEA endoplasmic reticulum
GO:0005789 IEA endoplasmic reticulum membrane
GO:0005794 IEA Golgi apparatus
GO:0009072 IEA aromatic amino acid family metabolic process
GO:0016701 IEA oxidoreductase activity, acting on single donors with incorporation of molecular oxygen
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031398 Hpd-001 protein_coding Mus_musculus 0 1290
ENSMUST00000154713 Hpd-002 protein_coding Mus_musculus 0 617
ENSMUST00000156539 Hpd-003 retained_intron Mus_musculus 0 514

Loading