C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: centrosomal protein 41kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000485736 CEP41-003 ENSG00000106477 9606 - 7:130397508-130401146 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000485736
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000485736 0.716±0.00 1.839±0.00 0.860±0.00 0.616±0.00 0.382±0.00 1.503±0.00 0.322±0.00 0.707±0.00 0.149±0.00 0.661±0.45 1.856±0.47 7.675±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PP CIL_0008PP_0001 VISTA 7:130073108-130674619
CIL_00026Z CIL_00026Z_0001 CGP 7:130380339-130442433
CIL_0006OS CIL_0006OS_0001 CGP 7:130393771-130506296

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000115131 Cep41-002 protein_coding Mus_musculus 0 603
ENSMUST00000140211 Cep41-004 nonsense_mediated_decay Mus_musculus 0 603
ENSMUST00000031810 Cep41-001 protein_coding Mus_musculus 0 603
ENSMUST00000132763 Cep41-009 processed_transcript Mus_musculus 0 601
ENSMUST00000153107 Cep41-008 processed_transcript Mus_musculus 0 353

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