C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RecQ protein-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000032370 Recql-011 ENSMUSG00000030243 10090 - 6:142350342-142387036 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaTestisENSMUST00000032370
Transcript ID Placenta Testis
ENSMUST00000032370 5.027±0.00 7.670±3.61

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006XQ CIL_0006XQ_0003 CGP 6:142298423-142363257
CIL_0005PY CIL_0005PY_0002 CGP 6:142345654-142387087
CIL_0005PT CIL_0005PT_0002 CGP 6:142350342-142403858

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005524 IEA ATP binding
GO:0006200 IEA ATP catabolic process
GO:0006260 IEA DNA replication
GO:0006281 IEA DNA repair
GO:0006310 IEA DNA recombination
GO:0032508 IEA DNA duplex unwinding
GO:0043140 IEA ATP-dependent 3'-5' DNA helicase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000314748 RECQL-005 protein_coding Homo_sapiens 0 508
ENST00000396093 RECQL-007 protein_coding Homo_sapiens 0 553
ENST00000421138 RECQL-002 protein_coding Homo_sapiens 0 1517
ENST00000444129 RECQL-001 protein_coding Homo_sapiens 0 1517
ENST00000536240 RECQL-006 protein_coding Homo_sapiens 0 202
ENST00000536964 RECQL-008 protein_coding Homo_sapiens 1.4013e-45 187
ENST00000542432 RECQL-004 protein_coding Homo_sapiens 0 259

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