C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: milk fat globule-EGF factor 8 protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000032825 Mfge8-201 ENSMUSG00000030605 10090 - 7:79133769-79149060 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastColonLiverLungMuscleOvaryPlacentaTestisENSMUST00000032825
Transcript ID Adipose Bladder Breast Colon Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000032825 29.312±1.09 17.371±0.39 54.144±1.91 9.108±1.25 5.272±2.19 21.410±1.95 2.246±0.64 15.256±0.00 67.158±36.64 3.772±0.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00011I CIL_00011I_0002 CGP 7:79117027-79149060
CIL_00011J CIL_00011J_0002 CGP 7:79133769-79365508

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001525 IEA angiogenesis
GO:0001786 IDA phosphatidylserine binding
GO:0005178 IDA integrin binding
GO:0005615 IDA extracellular space
GO:0006910 IDA phagocytosis, recognition
GO:0006911 IDA phagocytosis, engulfment
GO:0007155 IEA cell adhesion
GO:0007338 IEA single fertilization
GO:0008429 IDA phosphatidylethanolamine binding
GO:0009897 IDA external side of plasma membrane
GO:0016020 IEA membrane
GO:0019897 IDA extrinsic component of plasma membrane
GO:0031012 IEA extracellular matrix
GO:0031982 IEA vesicle
GO:0050766 IDA positive regulation of phagocytosis
GO:0070062 IEA extracellular vesicular exosome
GO:2000427 IDA positive regulation of apoptotic cell clearance

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000268150 MFGE8-001 protein_coding Homo_sapiens 0 540
ENST00000268151 MFGE8-004 protein_coding Homo_sapiens 7e-32 143
ENST00000542878 MFGE8-003 protein_coding Homo_sapiens 0 540
ENST00000558018 MFGE8-005 nonsense_mediated_decay Homo_sapiens 0 540
ENST00000560937 MFGE8-006 retained_intron Homo_sapiens 0 305
ENST00000566497 MFGE8-015 protein_coding Homo_sapiens 0 540

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