C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: milk fat globule-EGF factor 8 protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000268150 MFGE8-001 ENSG00000140545 9606 - 15:88898714-88913411 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000268150
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000268150 55.510±0.00 53.326±0.00 1.475±0.00 4.650±3.28 12.762±9.48 78.761±77.06 30.315±25.16 10.031±0.00 2.462±0.67 34.144±32.42 32.559±27.22 67.051±36.25 75.513±26.48 75.277±57.89

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00011I CIL_00011I_0001 CGP 15:88877288-88913411
CIL_00011J CIL_00011J_0001 CGP 15:88898683-89202360

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001525 IEA angiogenesis
GO:0001786 IEA phosphatidylserine binding
GO:0005178 IEA integrin binding
GO:0005515 IEA protein binding
GO:0005576 TAS extracellular region
GO:0005615 IDA extracellular space
GO:0006910 IEA phagocytosis, recognition
GO:0006911 IEA phagocytosis, engulfment
GO:0007155 IEA cell adhesion
GO:0007338 IEA single fertilization
GO:0008429 IEA phosphatidylethanolamine binding
GO:0009897 IEA external side of plasma membrane
GO:0016020 IDA membrane
GO:0016032 IEA viral process
GO:0019897 IEA extrinsic component of plasma membrane
GO:0031012 IDA extracellular matrix
GO:0031982 IDA vesicle
GO:0050766 IEA positive regulation of phagocytosis
GO:0070062 IDA extracellular vesicular exosome
GO:2000427 IEA positive regulation of apoptotic cell clearance

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000107409 Mfge8-202 protein_coding Mus_musculus 0 555
ENSMUST00000032825 Mfge8-201 protein_coding Mus_musculus 0 540

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