Institute of Cardiovascular Regeneration Webtool Repository

Warning (512): _cake_core_ cache was unable to write 'cake_dev_eng' to File cache [CORE/Cake/Cache/Cache.php, line 323]

Code Context

                ),
                E_USER_WARNING
            );

$key = 'cake_dev_eng'
$value = array(
	'LC_MESSAGES' => array()
)
$config = '_cake_core_'
$settings = array(
	'prefix' => '*****',
	'engine' => 'File',
	'path' => '/var/www/c-it-loci/app/tmp/cache/persistent/',
	'serialize' => true,
	'duration' => (int) 10,
	'lock' => true,
	'isWindows' => false,
	'mask' => (int) 436,
	'probability' => (int) 100,
	'groups' => array()
)
$success = false

Cache::write() - CORE/Cake/Cache/Cache.php, line 323
I18n::translate() - CORE/Cake/I18n/I18n.php, line 237
__d - CORE/Cake/basics.php, line 617
Cache::write() - CORE/Cake/Cache/Cache.php, line 321
DataSource::listSources() - CORE/Cake/Model/Datasource/DataSource.php, line 110
Mysql::listSources() - CORE/Cake/Model/Datasource/Database/Mysql.php, line 219
Model::setSource() - CORE/Cake/Model/Model.php, line 1142
Model::getDataSource() - CORE/Cake/Model/Model.php, line 3551
Model::query() - CORE/Cake/Model/Model.php, line 3353
RegionController::show() - APP/Controller/RegionController.php, line 338
ReflectionMethod::invokeArgs() - [internal], line ??
Controller::invokeAction() - CORE/Cake/Controller/Controller.php, line 490
Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 191
Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 165
[main] - APP/webroot/index.php, line 108

Warning (512): _cake_model_ cache was unable to write 'default_citloci_list' to File cache [CORE/Cake/Cache/Cache.php, line 323]

Code Context

                ),
                E_USER_WARNING
            );

$key = 'default_citloci_list'
$value = null
$config = '_cake_model_'
$settings = array(
	'prefix' => '*****',
	'engine' => 'File',
	'path' => '/var/www/c-it-loci/app/tmp/cache/models/',
	'serialize' => true,
	'duration' => (int) 10,
	'lock' => true,
	'isWindows' => false,
	'mask' => (int) 436,
	'probability' => (int) 100,
	'groups' => array()
)
$success = false

Cache::write() - CORE/Cake/Cache/Cache.php, line 323
DataSource::listSources() - CORE/Cake/Model/Datasource/DataSource.php, line 110
Mysql::listSources() - CORE/Cake/Model/Datasource/Database/Mysql.php, line 219
Model::setSource() - CORE/Cake/Model/Model.php, line 1142
Model::getDataSource() - CORE/Cake/Model/Model.php, line 3551
Model::query() - CORE/Cake/Model/Model.php, line 3353
RegionController::show() - APP/Controller/RegionController.php, line 338
ReflectionMethod::invokeArgs() - [internal], line ??
Controller::invokeAction() - CORE/Cake/Controller/Controller.php, line 490
Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 191
Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 165
[main] - APP/webroot/index.php, line 108

Warning (512): _cake_model_ cache was unable to write 'default_citloci_list' to File cache [CORE/Cake/Cache/Cache.php, line 323]

Code Context

                ),
                E_USER_WARNING
            );

$key = 'default_citloci_list'
$value = array(
	(int) 0 => 'conserved_region_elements',
	(int) 1 => 'conserved_regions',
	(int) 2 => 'diffexp',
	(int) 3 => 'experiment',
	(int) 4 => 'expressed_transcripts',
	(int) 5 => 'external_accessions',
	(int) 6 => 'genes',
	(int) 7 => 'go_annotations',
	(int) 8 => 'homologues',
	(int) 9 => 'maptranscripttoregion',
	(int) 10 => 'organism',
	(int) 11 => 'sample',
	(int) 12 => 'study',
	(int) 13 => 'synonyms',
	(int) 14 => 'transcripts'
)
$config = '_cake_model_'
$settings = array(
	'prefix' => '*****',
	'engine' => 'File',
	'path' => '/var/www/c-it-loci/app/tmp/cache/models/',
	'serialize' => true,
	'duration' => (int) 10,
	'lock' => true,
	'isWindows' => false,
	'mask' => (int) 436,
	'probability' => (int) 100,
	'groups' => array()
)
$success = false

Cache::write() - CORE/Cake/Cache/Cache.php, line 323
DataSource::listSources() - CORE/Cake/Model/Datasource/DataSource.php, line 110
Mysql::listSources() - CORE/Cake/Model/Datasource/Database/Mysql.php, line 236
Model::setSource() - CORE/Cake/Model/Model.php, line 1142
Model::getDataSource() - CORE/Cake/Model/Model.php, line 3551
Model::query() - CORE/Cake/Model/Model.php, line 3353
RegionController::show() - APP/Controller/RegionController.php, line 338
ReflectionMethod::invokeArgs() - [internal], line ??
Controller::invokeAction() - CORE/Cake/Controller/Controller.php, line 490
Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 191
Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 165
[main] - APP/webroot/index.php, line 108

Region Summary

CIL_00011J_0001 (Click to Hide/Show)

Source ID	Type	Tax ID	Position
ENSG00000140545-ENSG00000140526	CGP	9606	15:88898683-89202360
Gene	Transcript	Position	Biotype
ENSG00000140526 (ABHD2) abhydrolase domain containing 2	ENST00000352732 (ABHD2-001)	89088150-89202360	protein_coding
	ENST00000355100 (ABHD2-201)	89102441-89202360	protein_coding
	ENST00000562073 (ABHD2-011)	89116504-89183373	processed_transcript
	ENST00000562254 (ABHD2-009)	89088510-89094364	processed_transcript
	ENST00000564876 (ABHD2-004)	89088422-89113816	processed_transcript
	ENST00000565066 (ABHD2-006)	89088426-89151852	protein_coding
	ENST00000565825 (ABHD2-008)	89088482-89113791	processed_transcript
	ENST00000565973 (ABHD2-007)	89088430-89195751	protein_coding
	ENST00000568308 (ABHD2-010)	89185415-89193453	retained_intron
	ENST00000569411 (ABHD2-002)	89087459-89155390	protein_coding
	ENST00000569550 (ABHD2-005)	89088422-89116494	protein_coding
ENSG00000140545 (MFGE8) milk fat globule-EGF factor 8 protein	ENST00000268150 (MFGE8-001)	88898714-88913411	protein_coding
	ENST00000268151 (MFGE8-004)	88898713-88913381	protein_coding
	ENST00000542878 (MFGE8-003)	88899315-88913379	protein_coding
	ENST00000557944 (MFGE8-013)	88910780-88913362	retained_intron
	ENST00000558018 (MFGE8-005)	88898683-88913379	nonsense_mediated_decay
	ENST00000558029 (MFGE8-007)	88901551-88913362	protein_coding
	ENST00000558352 (MFGE8-002)	88906063-88913379	retained_intron
	ENST00000558773 (MFGE8-012)	88910204-88913317	retained_intron
	ENST00000559143 (MFGE8-011)	88909792-88910257	retained_intron
	ENST00000559259 (MFGE8-010)	88905382-88906716	retained_intron
	ENST00000559770 (MFGE8-009)	88906615-88910125	retained_intron
	ENST00000559997 (MFGE8-014)	88905399-88913379	processed_transcript
	ENST00000560553 (MFGE8-008)	88903790-88904928	processed_transcript
	ENST00000560937 (MFGE8-006)	88899298-88901960	retained_intron
	ENST00000566497 (MFGE8-015)	88898715-88913381	protein_coding
	ENST00000613965 (MFGE8-017)	88902183-88906661	nonsense_mediated_decay
	ENST00000617199 (MFGE8-016)	88902183-88904646	processed_transcript
ENSG00000259489 (KRT18P47) keratin 18 pseudogene 47	ENST00000561341 (KRT18P47-001)	88960070-88961046	processed_pseudogene
ENSG00000259699 (HMGB1P8) high mobility group box 1 pseudogene 8	ENST00000558211 (HMGB1P8-001)	89135547-89136495	processed_pseudogene
ENSG00000259948 (RP11-326A19.5)	ENST00000563131 (RP11-326A19.5-001)	89201091-89201768	processed_pseudogene
ENSG00000260123 (RP11-326A19.4)	ENST00000565938 (RP11-326A19.4-001)	89041223-89082819	lincRNA
ENSG00000261549 (RP11-320A16.1)	ENST00000565906 (RP11-320A16.1-001)	88989519-88990245	processed_pseudogene

CIL_00011J_0002 (Click to Hide/Show)

Source ID	Type	Tax ID	Position
ENSMUSG00000030605-ENSMUSG00000039202	CGP	10090	7:79133769-79365508
Gene	Transcript	Position	Biotype
ENSMUSG00000030605 (Mfge8) milk fat globule-EGF factor 8 protein	ENSMUST00000032825 (Mfge8-201)	79133769-79149060	protein_coding
	ENSMUST00000107409 (Mfge8-202)	79133769-79149060	protein_coding
ENSMUSG00000039202 (Abhd2) abhydrolase domain containing 2	ENSMUST00000037315 (Abhd2-001)	79273201-79365508	protein_coding
ENSMUSG00000039202 (Abhd2) abhydrolase domain containing 2	ENSMUST00000135333 (Abhd2-002)	79273255-79345371	processed_transcript
ENSMUSG00000089453 (Gm24224) predicted gene, 24224	ENSMUST00000158828 (Gm24224-201)	79352488-79352745	misc_RNA

Expression Patterns

Heat Map

Heat Map (Expressed Only)

Numeric Values

Gene

Transcript

Adipose

Adrenal

Bladder

Brain

Breast

Colon

Heart

Kidney

Liver

Lung

Muscle

Ovary

Placenta

Testis

ENSG00000140526

ENST00000352732

14.935±0.00

3.214±0.00

1.845±0.00

7.434±0.46

7.308±0.17

4.672±0.56

3.458±0.13

26.795±0.00

5.006±0.04

6.827±1.20

4.357±0.00

6.946±2.47

1.102±0.34

10.530±3.47

ENST00000355100

N/A

1.653±0.00

N/A

0.389±0.00

N/A

ENST00000562073

N/A

83.538±0.00

N/A

N/A

N/A

N/A

N/A

18.475±2.34

ENST00000568308

N/A

ENST00000569411

N/A

ENST00000569550

N/A

ENSG00000140545

ENST00000268150

55.510±0.00

53.326±0.00

1.475±0.00

4.650±3.28

12.762±9.48

78.761±77.06

30.315±25.16

10.031±0.00

2.462±0.67

34.144±32.42

32.559±27.22

67.051±36.25

75.513±26.48

75.277±57.89

ENST00000268151

N/A

43.532±0.00

N/A

15.400±12.63

1.012±0.00

N/A

0.641±0.00

N/A

33.183±0.00

N/A

ENST00000542878

61.896±0.00

67.479±0.00

N/A

11.549±0.00

46.871±0.00

1.390±0.00

48.300±0.00

15.374±0.00

2.818±0.00

N/A

54.553±0.00

22.877±20.48

50.218±0.00

18.393±0.00

ENST00000557944

N/A

ENST00000558018

N/A

0.928±0.00

N/A

2.276±0.00

N/A

43.170±0.00

N/A

ENST00000558029

N/A

2.690±0.00

N/A

N/A

N/A

N/A

N/A

N/A

1.585±0.00

N/A

ENST00000559997

N/A

ENST00000560553

N/A

ENST00000560937

N/A

3.952±0.00

N/A

ENST00000566497

44.096±0.00

N/A

9.439±0.00

54.384±0.00

90.313±0.00

60.215±0.00

25.463±0.00

2.492±1.12

80.868±0.00

58.715±0.00

N/A

38.429±4.76

N/A

ENST00000613965

N/A

2.442±0.00

N/A

ENST00000617199

N/A

0.844±0.00

2.658±0.00

N/A

ENSG00000259489

ENST00000561341

N/A

0.048±0.00

0.018±0.00

N/A

0.023±0.01

ENSG00000259699

ENST00000558211

1.146±0.00

0.619±0.00

N/A

0.369±0.34

0.382±0.14

0.475±0.31

0.342±0.01

1.034±0.00

0.217±0.18

1.096±0.00

0.853±0.00

0.425±0.30

0.153±0.00

0.420±0.29

ENSG00000259948

ENST00000563131

43.287±0.00

17.189±0.00

N/A

23.026±0.00

13.537±0.00

12.927±0.00

18.513±0.00

33.351±0.00

63.721±0.00

32.743±0.00

8.223±2.23

21.155±8.52

7.029±2.46

N/A

ENSG00000260123

ENST00000565938

0.022±0.00

0.755±0.00

0.376±0.00

N/A

0.023±0.00

0.021±0.00

0.058±0.00

0.133±0.00

N/A

0.272±0.00

N/A

0.088±0.00

0.087±0.00

0.330±0.27

ENSG00000261549

ENST00000565906

N/A

0.029±0.00

N/A

0.124±0.00

0.026±0.00

N/A

0.060±0.05

N/A

0.051±0.00

0.017±0.00

N/A

0.311±0.01

Gene

Transcript

Adipose

Adrenal

Bladder

Brain

Breast

Colon

Heart

Kidney

Liver

Lung

Muscle

Ovary

Placenta

Testis

ENSMUSG00000030605

ENSMUST00000032825

29.312±1.09

N/A

17.371±0.39

N/A

54.144±1.91

9.108±1.25

N/A

5.272±2.19

21.410±1.95

2.246±0.64

15.256±0.00

67.158±36.64

3.772±0.25

ENSMUST00000107409

170.244±47.12

214.282±4.92

58.745±1.86

50.611±11.02

261.320±108.12

72.559±6.78

61.357±8.87

76.307±1.98

20.072±13.98

170.555±10.91

17.932±2.55

204.465±59.21

122.005±43.90

27.127±11.18

ENSMUSG00000039202

ENSMUST00000037315

11.551±5.24

175.991±46.04

8.321±3.08

6.419±2.92

11.512±5.18

51.516±2.18

3.838±0.51

15.656±2.02

25.934±22.67

38.368±2.62

0.867±0.20

35.629±3.85

19.752±8.08

20.623±3.94

ENSMUST00000135333

N/A

ENSMUSG00000089453

ENSMUST00000158828

1.388±0.00

0.799±0.00

N/A

0.233±0.20

0.893±0.00

0.554±0.00

N/A

0.283±0.12

0.446±0.00

N/A

3.183±1.84

0.778±0.76

3.388±0.53

Warning (512): _cake_core_ cache was unable to write 'file_map' to File cache [CORE/Cake/Cache/Cache.php, line 323]

Code Context

                ),
                E_USER_WARNING
            );

$key = 'file_map'
$value = array(
	'Configure' => '/var/www/c-it-loci/lib/Cake/Core/Configure.php',
	'Hash' => '/var/www/c-it-loci/lib/Cake/Utility/Hash.php',
	'Cache' => '/var/www/c-it-loci/lib/Cake/Cache/Cache.php',
	'FileEngine' => '/var/www/c-it-loci/lib/Cake/Cache/Engine/FileEngine.php',
	'CacheEngine' => '/var/www/c-it-loci/lib/Cake/Cache/CacheEngine.php',
	'Inflector' => '/var/www/c-it-loci/lib/Cake/Utility/Inflector.php',
	'ErrorHandler' => '/var/www/c-it-loci/lib/Cake/Error/ErrorHandler.php',
	'CakePlugin' => '/var/www/c-it-loci/lib/Cake/Core/CakePlugin.php',
	'CakeLog' => '/var/www/c-it-loci/lib/Cake/Log/CakeLog.php',
	'LogEngineCollection' => '/var/www/c-it-loci/lib/Cake/Log/LogEngineCollection.php',
	'ObjectCollection' => '/var/www/c-it-loci/lib/Cake/Utility/ObjectCollection.php',
	'FileLog' => '/var/www/c-it-loci/lib/Cake/Log/Engine/FileLog.php',
	'BaseLog' => '/var/www/c-it-loci/lib/Cake/Log/Engine/BaseLog.php',
	'CakeLogInterface' => '/var/www/c-it-loci/lib/Cake/Log/CakeLogInterface.php',
	'Debugger' => '/var/www/c-it-loci/lib/Cake/Utility/Debugger.php',
	'String' => '/var/www/c-it-loci/lib/Cake/Utility/String.php',
	'Dispatcher' => '/var/www/c-it-loci/lib/Cake/Routing/Dispatcher.php',
	'CakeEventListener' => '/var/www/c-it-loci/lib/Cake/Event/CakeEventListener.php',
	'CakeRequest' => '/var/www/c-it-loci/lib/Cake/Network/CakeRequest.php',
	'CakeResponse' => '/var/www/c-it-loci/lib/Cake/Network/CakeResponse.php',
	'CakeEvent' => '/var/www/c-it-loci/lib/Cake/Event/CakeEvent.php',
	'CakeEventManager' => '/var/www/c-it-loci/lib/Cake/Event/CakeEventManager.php',
	'AssetDispatcher' => '/var/www/c-it-loci/lib/Cake/Routing/Filter/AssetDispatcher.php',
	'DispatcherFilter' => '/var/www/c-it-loci/lib/Cake/Routing/DispatcherFilter.php',
	'CacheDispatcher' => '/var/www/c-it-loci/lib/Cake/Routing/Filter/CacheDispatcher.php',
	'Router' => '/var/www/c-it-loci/lib/Cake/Routing/Router.php',
	'CakeRoute' => '/var/www/c-it-loci/lib/Cake/Routing/Route/CakeRoute.php',
	'PluginShortRoute' => '/var/www/c-it-loci/lib/Cake/Routing/Route/PluginShortRoute.php',
	'RegionController' => '/var/www/c-it-loci/app/Controller/RegionController.php',
	'AppController' => '/var/www/c-it-loci/app/Controller/AppController.php',
	'Controller' => '/var/www/c-it-loci/lib/Cake/Controller/Controller.php',
	'Object' => '/var/www/c-it-loci/lib/Cake/Core/Object.php',
	'ComponentCollection' => '/var/www/c-it-loci/lib/Cake/Controller/ComponentCollection.php',
	'SessionComponent' => '/var/www/c-it-loci/lib/Cake/Controller/Component/SessionComponent.php',
	'Component' => '/var/www/c-it-loci/lib/Cake/Controller/Component.php',
	'RequestHandlerComponent' => '/var/www/c-it-loci/lib/Cake/Controller/Component/RequestHandlerComponent.php',
	'ClassRegistry' => '/var/www/c-it-loci/lib/Cake/Utility/ClassRegistry.php',
	'Region' => '/var/www/c-it-loci/app/Model/Region.php',
	'AppModel' => '/var/www/c-it-loci/app/Model/AppModel.php',
	'Model' => '/var/www/c-it-loci/lib/Cake/Model/Model.php',
	'BehaviorCollection' => '/var/www/c-it-loci/lib/Cake/Model/BehaviorCollection.php',
	'ConnectionManager' => '/var/www/c-it-loci/lib/Cake/Model/ConnectionManager.php',
	'Mysql' => '/var/www/c-it-loci/lib/Cake/Model/Datasource/Database/Mysql.php',
	'DboSource' => '/var/www/c-it-loci/lib/Cake/Model/Datasource/DboSource.php',
	'DataSource' => '/var/www/c-it-loci/lib/Cake/Model/Datasource/DataSource.php',
	'I18n' => '/var/www/c-it-loci/lib/Cake/I18n/I18n.php',
	'L10n' => '/var/www/c-it-loci/lib/Cake/I18n/L10n.php',
	'CakeSession' => '/var/www/c-it-loci/lib/Cake/Model/Datasource/CakeSession.php',
	'View' => '/var/www/c-it-loci/lib/Cake/View/View.php',
	'HelperCollection' => '/var/www/c-it-loci/lib/Cake/View/HelperCollection.php',
	'ViewBlock' => '/var/www/c-it-loci/lib/Cake/View/ViewBlock.php',
	'HtmlHelper' => '/var/www/c-it-loci/lib/Cake/View/Helper/HtmlHelper.php',
	'AppHelper' => '/var/www/c-it-loci/app/View/Helper/AppHelper.php',
	'Helper' => '/var/www/c-it-loci/lib/Cake/View/Helper.php',
	'FormHelper' => '/var/www/c-it-loci/lib/Cake/View/Helper/FormHelper.php',
	'SessionHelper' => '/var/www/c-it-loci/lib/Cake/View/Helper/SessionHelper.php'
)
$config = '_cake_core_'
$settings = array(
	'prefix' => '*****',
	'engine' => 'File',
	'path' => '/var/www/c-it-loci/app/tmp/cache/persistent/',
	'serialize' => true,
	'duration' => (int) 10,
	'lock' => true,
	'isWindows' => false,
	'mask' => (int) 436,
	'probability' => (int) 100,
	'groups' => array()
)
$success = false

Cache::write() - CORE/Cake/Cache/Cache.php, line 323
App::shutdown() - CORE/Cake/Core/App.php, line 899
[main] - [internal], line ??

Warning (512): _cake_core_ cache was unable to write 'method_cache' to File cache [CORE/Cake/Cache/Cache.php, line 323]

Code Context

                ),
                E_USER_WARNING
            );

$key = 'method_cache'
$value = array(
	(int) 0 => false,
	'name' => array(
		'45b989c52610ac6d773f6b83d6108190' => '`citloci`'
	)
)
$config = '_cake_core_'
$settings = array(
	'prefix' => '*****',
	'engine' => 'File',
	'path' => '/var/www/c-it-loci/app/tmp/cache/persistent/',
	'serialize' => true,
	'duration' => (int) 10,
	'lock' => true,
	'isWindows' => false,
	'mask' => (int) 436,
	'probability' => (int) 100,
	'groups' => array()
)
$success = false

Cache::write() - CORE/Cake/Cache/Cache.php, line 323
DboSource::__destruct() - CORE/Cake/Model/Datasource/DboSource.php, line 3539
[main] - [internal], line ??

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

Expression Patterns

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