C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mcf.2 transforming sequence
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000033478 Mcf2-002 ENSMUSG00000031139 10090 - X:60055959-60147643 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainColonKidneyLiverOvaryTestisENSMUST00000033478
Transcript ID Adrenal Bladder Brain Colon Kidney Liver Ovary Testis
ENSMUST00000033478 0.073±0.00 0.003±0.00 0.048±0.00 0.042±0.00 0.013±0.00 0.019±0.01 0.184±0.10 0.330±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000PO CIL_0000PO_0003 CGP X:59999464-60179089
CIL_0000PN CIL_0000PN_0003 CGP X:60055956-60592698

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005085 TAS guanyl-nucleotide exchange factor activity
GO:0005089 IEA Rho guanyl-nucleotide exchange factor activity
GO:0005515 IPI protein binding
GO:0016358 IMP dendrite development
GO:0032321 IEA positive regulation of Rho GTPase activity
GO:0035556 IEA intracellular signal transduction
GO:0043547 TAS positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000338585 MCF2-004 protein_coding Homo_sapiens 0 2386
ENST00000370573 MCF2-003 protein_coding Homo_sapiens 0 1382
ENST00000370576 MCF2-002 protein_coding Homo_sapiens 0 1530
ENST00000414978 MCF2-201 protein_coding Homo_sapiens 0 1297
ENST00000437564 MCF2-006 protein_coding Homo_sapiens 0 985
ENST00000446225 MCF2-005 protein_coding Homo_sapiens 0 1024
ENST00000519895 MCF2-008 protein_coding Homo_sapiens 0 2302
ENST00000520602 MCF2-001 protein_coding Homo_sapiens 0 1297
ENST00000536274 MCF2-202 protein_coding Homo_sapiens 0 1024

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