C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: NEDD8 activating enzyme E1 subunit 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000034349 Nae1-001 ENSMUSG00000031878 10090 - 8:104511028-104534637 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034349
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034349 4.691±0.95 18.064±3.81 15.140±8.64 3.505±1.47 2.079±0.95 4.616±1.09 3.590±1.00 8.677±6.63 4.765±1.27 11.029±0.93 4.809±4.08 12.390±6.11 9.574±4.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WN CIL_0007WN_0002 VISTA 8:104309522-104912018
CIL_0004IV CIL_0004IV_0002 CGP 8:104446719-104534637
CIL_0003LY CIL_0003LY_0003 CGP 8:104511028-104550343

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IBA nucleus
GO:0005829 IBA cytosol
GO:0005886 IEA plasma membrane
GO:0019781 IBA NEDD8 activating enzyme activity
GO:0031625 IEA ubiquitin protein ligase binding
GO:0033314 IEA mitotic DNA replication checkpoint
GO:0042981 IEA regulation of apoptotic process
GO:0043523 IEA regulation of neuron apoptotic process
GO:0045116 IBA protein neddylation
GO:0046982 IEA protein heterodimerization activity
GO:0051402 IEA neuron apoptotic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000290810 NAE1-001 protein_coding Homo_sapiens 0 2407
ENST00000359087 NAE1-002 protein_coding Homo_sapiens 0 2366
ENST00000379463 NAE1-005 protein_coding Homo_sapiens 0 2309
ENST00000394074 NAE1-004 protein_coding Homo_sapiens 0 2135
ENST00000561579 NAE1-010 protein_coding Homo_sapiens 0 869
ENST00000562074 NAE1-008 retained_intron Homo_sapiens 0 274
ENST00000562428 NAE1-018 protein_coding Homo_sapiens 0 198
ENST00000562757 NAE1-016 retained_intron Homo_sapiens 0 494
ENST00000563185 NAE1-014 protein_coding Homo_sapiens 0 422
ENST00000563221 NAE1-017 retained_intron Homo_sapiens 1.99993e-41 172
ENST00000563253 NAE1-013 nonsense_mediated_decay Homo_sapiens 0 671
ENST00000563419 NAE1-006 retained_intron Homo_sapiens 0 370
ENST00000564040 NAE1-022 processed_transcript Homo_sapiens 0 492
ENST00000565535 NAE1-021 protein_coding Homo_sapiens 0 518
ENST00000566336 NAE1-020 protein_coding Homo_sapiens 0 667
ENST00000566663 NAE1-011 protein_coding Homo_sapiens 0 464
ENST00000567521 NAE1-007 retained_intron Homo_sapiens 0 427
ENST00000567743 NAE1-003 nonsense_mediated_decay Homo_sapiens 0 806
ENST00000568672 NAE1-009 retained_intron Homo_sapiens 0 466
ENST00000569348 NAE1-019 nonsense_mediated_decay Homo_sapiens 0 455
ENST00000569388 NAE1-015 nonsense_mediated_decay Homo_sapiens 0 398
ENST00000569963 NAE1-012 retained_intron Homo_sapiens 0 337

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