C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004IV_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000249961-ENSG00000159593 CGP 9606 16:66754976-66873256
GeneTranscriptPositionBiotype
ENSG00000159593 (NAE1)
NEDD8 activating enzyme E1 subunit 1 		ENST00000290810 (NAE1-001) 66802875-66830997 protein_coding
ENST00000359087 (NAE1-002) 66802875-66830976 protein_coding
ENST00000379463 (NAE1-005) 66802880-66830976 protein_coding
ENST00000394074 (NAE1-004) 66802912-66830955 protein_coding
ENST00000561579 (NAE1-010) 66817470-66873256 protein_coding
ENST00000562074 (NAE1-008) 66805630-66808694 retained_intron
ENST00000562428 (NAE1-018) 66802875-66808548 protein_coding
ENST00000562757 (NAE1-016) 66823342-66830976 retained_intron
ENST00000563185 (NAE1-014) 66817434-66830973 protein_coding
ENST00000563221 (NAE1-017) 66802880-66806069 retained_intron
ENST00000563253 (NAE1-013) 66816647-66830959 nonsense_mediated_decay
ENST00000563419 (NAE1-006) 66824516-66830960 retained_intron
ENST00000564040 (NAE1-022) 66818633-66830963 processed_transcript
ENST00000565535 (NAE1-021) 66823230-66830976 protein_coding
ENST00000566336 (NAE1-020) 66821456-66830917 protein_coding
ENST00000566663 (NAE1-011) 66802878-66810413 protein_coding
ENST00000567521 (NAE1-007) 66813129-66816716 retained_intron
ENST00000567743 (NAE1-003) 66816614-66830968 nonsense_mediated_decay
ENST00000568672 (NAE1-009) 66802880-66806145 retained_intron
ENST00000569348 (NAE1-019) 66823281-66830976 nonsense_mediated_decay
ENST00000569388 (NAE1-015) 66821446-66830977 nonsense_mediated_decay
ENST00000569963 (NAE1-012) 66826099-66830976 retained_intron
ENSG00000168748 (CA7)
carbonic anhydrase VII 		ENST00000338437 (CA7-001) 66844379-66854149 protein_coding
ENST00000394069 (CA7-002) 66844932-66854153 protein_coding
ENST00000548332 (CA7-003) 66844932-66853720 nonsense_mediated_decay
ENSG00000249961 (CCDC79)
coiled-coil domain containing 79 		ENST00000313294 (CCDC79-001) 66758299-66801620 nonsense_mediated_decay
ENST00000433154 (CCDC79-201) 66754976-66801620 protein_coding
ENST00000558713 (CCDC79-003) 66754976-66801611 protein_coding
ENST00000559050 (CCDC79-005) 66788239-66801584 protein_coding
ENST00000559403 (CCDC79-002) 66758304-66759208 protein_coding
ENST00000561333 (CCDC79-004) 66767428-66801026 processed_transcript
ENSG00000258122 (RP11-61A14.1)
 ENST00000551187 (RP11-61A14.1-001) 66841433-66853448 antisense
CIL_0004IV_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000052616-ENSMUSG00000031878 CGP 10090 8:104446719-104534637
GeneTranscriptPositionBiotype
ENSMUSG00000031878 (Nae1)
NEDD8 activating enzyme E1 subunit 1 		ENSMUST00000034349 (Nae1-001) 104511028-104534637 protein_coding
ENSMUST00000159330 (Nae1-009) 104511037-104518043 retained_intron
ENSMUST00000159393 (Nae1-002) 104522905-104534588 retained_intron
ENSMUST00000159696 (Nae1-007) 104519786-104523213 retained_intron
ENSMUST00000159702 (Nae1-005) 104528030-104534614 retained_intron
ENSMUST00000160148 (Nae1-010) 104513200-104517049 retained_intron
ENSMUST00000160913 (Nae1-003) 104517537-104527915 retained_intron
ENSMUST00000161411 (Nae1-011) 104511034-104516989 retained_intron
ENSMUST00000161462 (Nae1-008) 104511028-104523181 processed_transcript
ENSMUST00000161474 (Nae1-006) 104523334-104527334 retained_intron
ENSMUST00000162466 (Nae1-004) 104511028-104534636 protein_coding
ENSMUSG00000052616 (Ccdc79)
coiled-coil domain containing 79 		ENSMUST00000064576 (Ccdc79-001) 104446719-104509887 protein_coding
ENSMUST00000159713 (Ccdc79-004) 104447038-104509882 nonsense_mediated_decay
ENSMUST00000161520 (Ccdc79-003) 104447037-104509883 nonsense_mediated_decay
ENSMUST00000162014 (Ccdc79-002) 104447762-104509910 protein_coding
ENSMUSG00000077633 (Gm22148)
predicted gene, 22148 		ENSMUST00000104445 (Gm22148-201) 104507902-104508008 snRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004IV_0001ENSG00000159593ENST00000290810ENST00000359087ENST00000379463ENST00000394074ENST00000561579ENST00000562074ENST00000562428ENST00000562757ENST00000563185ENST00000563221ENST00000563253ENST00000563419ENST00000564040ENST00000565535ENST00000566336ENST00000566663ENST00000567521ENST00000567743ENST00000568672ENST00000569348ENST00000569388ENST00000569963ENSG00000168748ENST00000338437ENST00000394069ENST00000548332ENSG00000249961ENST00000313294ENST00000433154ENST00000558713ENST00000559050ENST00000559403ENST00000561333ENSG00000258122ENST00000551187CIL_0004IV_0002ENSMUSG00000031878ENSMUST00000034349ENSMUST00000159330ENSMUST00000159393ENSMUST00000159696ENSMUST00000159702ENSMUST00000160148ENSMUST00000160913ENSMUST00000161411ENSMUST00000161462ENSMUST00000161474ENSMUST00000162466ENSMUSG00000052616ENSMUST00000064576ENSMUST00000159713ENSMUST00000161520ENSMUST00000162014ENSMUSG00000077633ENSMUST00000104445
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004IV_0001ENSG00000159593ENST00000290810ENST00000379463ENST00000394074ENST00000563253ENST00000567743ENST00000568672ENSG00000168748ENST00000338437ENST00000394069ENST00000548332ENSG00000249961ENST00000313294ENST00000433154ENST00000558713ENST00000559050ENST00000559403ENST00000561333ENSG00000258122ENST00000551187CIL_0004IV_0002ENSMUSG00000031878ENSMUST00000034349ENSMUST00000159330ENSMUST00000159393ENSMUST00000159702ENSMUST00000160148ENSMUST00000160913ENSMUST00000161462ENSMUST00000162466ENSMUSG00000052616ENSMUST00000064576ENSMUST00000159713ENSMUST00000161520ENSMUST00000162014ENSMUSG00000077633ENSMUST00000104445
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000159593 ENST00000290810 3.634±0.00 N/A 0.864±0.00 5.639±0.00 N/A 2.181±0.76 2.098±0.00 N/A 2.485±1.44 N/A 2.924±0.00 8.657±4.72 4.365±0.62 11.475±3.32
ENST00000359087 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000379463 N/A N/A N/A N/A N/A N/A 1.355±0.00 N/A 1.348±0.00 N/A N/A N/A N/A N/A
ENST00000394074 7.672±0.00 N/A 0.853±0.00 7.412±4.38 6.467±0.00 7.336±0.00 1.796±0.00 7.501±0.00 4.459±0.00 2.049±0.25 2.298±0.00 3.770±2.24 4.356±0.18 18.469±0.00
ENST00000561579 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562074 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562428 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562757 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563185 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563221 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563253 N/A N/A N/A N/A N/A N/A N/A 5.024±0.00 N/A N/A N/A N/A N/A N/A
ENST00000563419 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564040 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565535 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566336 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566663 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567521 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567743 N/A N/A N/A N/A N/A N/A N/A N/A 1.955±0.00 2.915±0.00 N/A 1.667±0.00 N/A N/A
ENST00000568672 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.192±0.00 N/A N/A N/A
ENST00000569348 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569388 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569963 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000168748 ENST00000338437 N/A 0.034±0.00 N/A 1.582±0.00 N/A 4.128±2.27 N/A N/A N/A N/A N/A 0.049±0.00 N/A 0.514±0.02
ENST00000394069 N/A N/A N/A 2.100±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.497±0.00
ENST00000548332 N/A N/A N/A N/A N/A N/A 0.021±0.00 0.024±0.00 0.041±0.00 N/A N/A 0.047±0.00 N/A 0.347±0.00
ENSG00000249961 ENST00000313294 0.016±0.00 N/A N/A 0.027±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.354±0.00
ENST00000433154 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.892±0.00
ENST00000558713 N/A N/A N/A N/A N/A N/A N/A 0.025±0.00 N/A N/A N/A 0.020±0.00 N/A 2.076±0.10
ENST00000559050 N/A N/A N/A 0.109±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559403 0.262±0.00 0.939±0.00 N/A 0.258±0.00 0.351±0.03 0.331±0.00 0.084±0.00 0.988±0.42 0.060±0.00 0.084±0.00 0.243±0.02 0.161±0.08 0.198±0.00 N/A
ENST00000561333 0.020±0.00 0.143±0.00 N/A 0.069±0.00 0.025±0.01 0.031±0.00 0.055±0.00 0.044±0.00 0.039±0.00 0.017±0.00 0.009±0.00 0.020±0.00 N/A 0.946±0.00
ENSG00000258122 ENST00000551187 N/A N/A N/A 0.885±0.00 0.065±0.00 N/A N/A 0.065±0.00 N/A 0.092±0.00 N/A 0.265±0.07 0.255±0.00 0.709±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031878 ENSMUST00000034349 4.691±0.95 N/A 18.064±3.81 15.140±8.64 3.505±1.47 2.079±0.95 4.616±1.09 3.590±1.00 8.677±6.63 4.765±1.27 11.029±0.93 4.809±4.08 12.390±6.11 9.574±4.06
ENSMUST00000159330 N/A N/A N/A N/A N/A N/A 3.510±0.00 N/A N/A N/A N/A 1.120±0.00 N/A N/A
ENSMUST00000159393 0.675±0.24 0.371±0.17 2.228±0.57 2.438±0.00 0.442±0.02 N/A 0.420±0.03 0.380±0.00 0.603±0.32 0.997±0.21 N/A 0.939±0.56 0.988±0.00 1.038±0.00
ENSMUST00000159696 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000159702 N/A 1.580±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160148 4.097±1.57 0.966±0.35 N/A N/A 3.958±1.46 2.342±0.19 2.942±0.56 2.520±0.25 1.695±0.29 4.668±0.86 N/A 2.693±1.26 N/A N/A
ENSMUST00000160913 N/A 0.285±0.07 N/A 0.978±0.00 0.713±0.21 0.545±0.03 N/A N/A 0.380±0.00 N/A N/A 0.997±0.45 N/A 0.580±0.00
ENSMUST00000161411 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161462 N/A N/A N/A N/A N/A N/A N/A 2.309±0.00 N/A N/A N/A N/A N/A N/A
ENSMUST00000161474 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162466 N/A 1.170±0.55 N/A 13.523±0.00 1.031±0.14 1.801±0.00 N/A 1.916±0.54 2.125±0.90 1.802±0.00 1.759±0.00 6.505±5.41 11.551±3.16 13.340±0.00
ENSMUSG00000052616 ENSMUST00000064576 N/A N/A N/A N/A N/A 0.090±0.02 N/A 0.019±0.00 0.012±0.00 0.055±0.00 N/A 0.213±0.20 0.029±0.00 1.114±0.37
ENSMUST00000159713 0.020±0.00 0.072±0.03 N/A N/A 0.233±0.01 0.040±0.00 0.016±0.00 0.061±0.03 N/A 0.059±0.01 0.014±0.00 0.199±0.12 0.078±0.05 1.468±0.25
ENSMUST00000161520 N/A N/A 0.045±0.00 N/A N/A N/A 0.012±0.00 0.024±0.01 0.034±0.01 N/A 0.015±0.01 N/A 0.044±0.00 N/A
ENSMUST00000162014 0.015±0.00 N/A N/A 0.030±0.00 0.086±0.06 0.085±0.00 N/A 0.078±0.00 0.012±0.00 0.163±0.00 0.010±0.00 0.148±0.07 0.153±0.09 3.580±2.38
ENSMUSG00000077633 ENSMUST00000104445 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 16.904±0.00

Loading