C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transducin-like enhancer of split 3, homolog of Drosophila E(spl)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000034820 Tle3-002 ENSMUSG00000032280 10090 + 9:61372858-61418487 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastKidneyLiverLungMusclePlacentaENSMUST00000034820
Transcript ID Adipose Adrenal Breast Kidney Liver Lung Muscle Placenta
ENSMUST00000034820 3.216±0.00 10.017±0.00 2.674±0.00 2.205±0.00 0.666±0.11 2.638±0.00 0.418±0.03 7.692±2.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008V4 CIL_0008V4_0002 VISTA 9:61070058-61671069
CIL_0009BU CIL_0009BU_0002 VISTA 9:61300844-61903666

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000100632 gro2-202 protein_coding Danio_rerio 0 1373
ENSDART00000100633 gro2-203 protein_coding Danio_rerio 0 366
ENSDART00000025018 gro2-201 protein_coding Danio_rerio 0 366
ENSDART00000045679 gro2-001 protein_coding Danio_rerio 0 366
ENST00000317509 TLE3-004 protein_coding Homo_sapiens 0 3518
ENST00000376472 TLE1-201 protein_coding Homo_sapiens 0 904
ENST00000376499 TLE1-001 protein_coding Homo_sapiens 0 911
ENST00000440567 TLE3-010 protein_coding Homo_sapiens 0 3077
ENST00000451782 TLE3-030 protein_coding Homo_sapiens 0 3125
ENST00000539550 TLE3-022 protein_coding Homo_sapiens 0 2449
ENST00000542329 TLE3-028 retained_intron Homo_sapiens 0 797
ENST00000557815 TLE3-023 retained_intron Homo_sapiens 0 351
ENST00000557907 TLE3-015 protein_coding Homo_sapiens 0 3127
ENST00000557919 TLE3-017 nonsense_mediated_decay Homo_sapiens 0 3733
ENST00000557984 TLE3-026 protein_coding Homo_sapiens 0 399
ENST00000557997 TLE3-016 protein_coding Homo_sapiens 0 3637
ENST00000558201 TLE3-011 protein_coding Homo_sapiens 0 3037
ENST00000558379 TLE3-008 protein_coding Homo_sapiens 0 3085
ENST00000558939 TLE3-001 protein_coding Homo_sapiens 0 3629
ENST00000559048 TLE3-007 protein_coding Homo_sapiens 0 3092
ENST00000559191 TLE3-009 protein_coding Homo_sapiens 0 1574
ENST00000559608 TLE3-029 retained_intron Homo_sapiens 0 348
ENST00000559826 TLE3-005 retained_intron Homo_sapiens 0 385
ENST00000559929 TLE3-013 protein_coding Homo_sapiens 0 2593
ENST00000560525 TLE3-019 nonsense_mediated_decay Homo_sapiens 0 3509
ENST00000560589 TLE3-012 protein_coding Homo_sapiens 0 2977
ENST00000560939 TLE3-020 protein_coding Homo_sapiens 0 3064
ENST00000560996 TLE3-014 protein_coding Homo_sapiens 0 545
ENST00000561453 TLE3-002 nonsense_mediated_decay Homo_sapiens 0 3589

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