C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transducin-like enhancer of split 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000557997 TLE3-016 ENSG00000140332 9606 - 15:70049799-70097888 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000557997
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000557997 6.930±0.00 8.075±0.00 7.659±0.00 8.136±0.00 0.495±0.38 0.836±0.00 0.498±0.00 14.549±0.00 2.040±0.00 8.664±0.00 8.026±1.41 6.931±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009BU CIL_0009BU_0001 VISTA 15:69554908-70157197
CIL_0008V4 CIL_0008V4_0001 VISTA 15:69799237-70400274
CIL_0004GW CIL_0004GW_0002 CGP 15:70047790-70763593

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000159386 Tle3-008 protein_coding Mus_musculus 0 3718
ENSMUST00000034820 Tle3-002 protein_coding Mus_musculus 0 3637
ENSMUST00000162583 Tle3-005 protein_coding Mus_musculus 0 3435
ENSMUST00000162973 Tle3-001 protein_coding Mus_musculus 0 3107
ENSMUST00000159050 Tle3-007 protein_coding Mus_musculus 0 3085
ENSMUST00000161207 Tle3-006 protein_coding Mus_musculus 0 3077
ENSMUST00000159630 Tle3-010 protein_coding Mus_musculus 0 3064
ENSMUST00000161689 Tle3-011 protein_coding Mus_musculus 0 3037
ENSMUST00000160882 Tle3-003 protein_coding Mus_musculus 0 2492
ENSMUST00000178113 Tle3-201 protein_coding Mus_musculus 0 2466
ENSMUST00000162127 Tle3-009 protein_coding Mus_musculus 0 2449
ENSMUST00000161993 Tle3-014 protein_coding Mus_musculus 0 1467
ENSMUST00000159140 Tle3-012 retained_intron Mus_musculus 0 1411
ENSDART00000100020 gro1-201 protein_coding Danio_rerio 0 1363
ENSDART00000130553 gro1-001 protein_coding Danio_rerio 0 1363
ENSDART00000100633 gro2-203 protein_coding Danio_rerio 0 1290
ENSDART00000100632 gro2-202 protein_coding Danio_rerio 0 1262
ENSDART00000025018 gro2-201 protein_coding Danio_rerio 0 1212
ENSDART00000045679 gro2-001 protein_coding Danio_rerio 0 1212
ENSMUST00000162962 Tle3-017 processed_transcript Mus_musculus 0 1007
ENSMUST00000160724 Tle3-004 protein_coding Mus_musculus 0 833
ENSMUST00000160541 Tle3-015 protein_coding Mus_musculus 0 604
ENSMUST00000162281 Tle3-018 processed_transcript Mus_musculus 0 398
ENSMUST00000161194 Tle3-016 protein_coding Mus_musculus 0 316

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