C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0009BU_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
mm29 VISTA 9606 15:69554908-70157197
GeneTranscriptPositionBiotype
ENSG00000140332 (TLE3)
transducin-like enhancer of split 3 		ENST00000317509 (TLE3-004) 70048275-70097900 protein_coding
ENST00000440567 (TLE3-010) 70049802-70096752 protein_coding
ENST00000451782 (TLE3-030) 70050097-70096844 protein_coding
ENST00000537387 (TLE3-024) 70066144-70074595 nonsense_mediated_decay
ENST00000539550 (TLE3-022) 70049802-70094785 protein_coding
ENST00000542329 (TLE3-028) 70053174-70055263 retained_intron
ENST00000557815 (TLE3-023) 70048977-70058790 retained_intron
ENST00000557907 (TLE3-015) 70050097-70096798 protein_coding
ENST00000557919 (TLE3-017) 70048869-70097571 nonsense_mediated_decay
ENST00000557984 (TLE3-026) 70066123-70095588 protein_coding
ENST00000557997 (TLE3-016) 70049799-70097888 protein_coding
ENST00000558201 (TLE3-011) 70049802-70096437 protein_coding
ENST00000558379 (TLE3-008) 70050097-70096798 protein_coding
ENST00000558939 (TLE3-001) 70047790-70098176 protein_coding
ENST00000559048 (TLE3-007) 70049799-70096604 protein_coding
ENST00000559191 (TLE3-009) 70049836-70097866 protein_coding
ENST00000559574 (TLE3-025) 70097405-70097848 processed_transcript
ENST00000559608 (TLE3-029) 70049801-70051505 retained_intron
ENST00000559826 (TLE3-005) 70058091-70058815 retained_intron
ENST00000559929 (TLE3-013) 70049091-70096851 protein_coding
ENST00000560525 (TLE3-019) 70048976-70097019 nonsense_mediated_decay
ENST00000560589 (TLE3-012) 70049091-70095950 protein_coding
ENST00000560939 (TLE3-020) 70049799-70096701 protein_coding
ENST00000560996 (TLE3-014) 70066143-70096302 protein_coding
ENST00000561453 (TLE3-002) 70049799-70097917 nonsense_mediated_decay
ENSG00000215958 (AC021818.1)
 ENST00000401139 (AC021818.1-201) 69785415-69785504 miRNA
ENSG00000245750 (RP11-279F6.1)
 ENST00000498938 (RP11-279F6.1-003) 69561723-69571083 lincRNA
ENST00000558309 (RP11-279F6.1-001) 69463107-69565235 lincRNA
ENST00000558633 (RP11-279F6.1-005) 69463026-69565237 lincRNA
ENST00000558781 (RP11-279F6.1-008) 69558192-69571083 lincRNA
ENST00000559025 (RP11-279F6.1-002) 69463107-69565235 lincRNA
ENST00000559029 (RP11-279F6.1-007) 69552716-69563670 lincRNA
ENST00000559477 (RP11-279F6.1-004) 69565192-69571440 lincRNA
ENST00000560882 (RP11-279F6.1-006) 69468036-69571083 lincRNA
ENSG00000259309 (RP11-19J5.2)
 ENST00000561316 (RP11-19J5.2-001) 69820756-69822856 lincRNA
ENSG00000259496 (RP11-19J5.1)
 ENST00000560960 (RP11-19J5.1-001) 69803316-69804046 processed_pseudogene
ENSG00000259641 (PCAT29)
prostate cancer associated transcript 29 (non-protein coding) 		ENST00000558411 (PCAT29-001) 69592129-69612890 lincRNA
ENST00000558941 (PCAT29-003) 69670130-69695748 lincRNA
ENST00000559212 (PCAT29-004) 69671748-69695750 lincRNA
ENST00000560655 (PCAT29-002) 69592213-69695730 lincRNA
CIL_0009BU_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
mm29 VISTA 10090 9:61300844-61903666
GeneTranscriptPositionBiotype
ENSMUSG00000032280 (Tle3)
transducin-like enhancer of split 3, homolog of Drosophila E(spl) 		ENSMUST00000034820 (Tle3-002) 61372858-61418487 protein_coding
ENSMUST00000159050 (Tle3-007) 61373438-61416716 protein_coding
ENSMUST00000159140 (Tle3-012) 61402461-61417835 retained_intron
ENSMUST00000159386 (Tle3-008) 61372383-61417905 protein_coding
ENSMUST00000159630 (Tle3-010) 61373535-61418080 protein_coding
ENSMUST00000160541 (Tle3-015) 61373482-61401892 protein_coding
ENSMUST00000160724 (Tle3-004) 61373416-61407439 protein_coding
ENSMUST00000160882 (Tle3-003) 61373385-61417837 protein_coding
ENSMUST00000161194 (Tle3-016) 61374329-61394637 protein_coding
ENSMUST00000161207 (Tle3-006) 61373514-61416976 protein_coding
ENSMUST00000161689 (Tle3-011) 61373672-61416976 protein_coding
ENSMUST00000161993 (Tle3-014) 61373381-61409365 protein_coding
ENSMUST00000162127 (Tle3-009) 61375529-61416976 protein_coding
ENSMUST00000162281 (Tle3-018) 61409937-61418419 processed_transcript
ENSMUST00000162583 (Tle3-005) 61373219-61418486 protein_coding
ENSMUST00000162962 (Tle3-017) 61401859-61410134 processed_transcript
ENSMUST00000162973 (Tle3-001) 61373417-61418490 protein_coding
ENSMUST00000178113 (Tle3-201) 61372366-61418497 protein_coding
ENSMUSG00000074256 (Gm10655)
predicted gene 10655 		ENSMUST00000098658 (Gm10655-201) 61370797-61372193 lincRNA
ENSMUST00000187131 (Gm10655-001) 61370878-61371627 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0009BU_0001ENSG00000140332ENST00000317509ENST00000440567ENST00000451782ENST00000557815ENST00000557907ENST00000557997ENST00000558379ENST00000558939ENST00000559191ENST00000559608ENST00000559929ENST00000560525ENST00000560996ENSG00000215958ENST00000401139ENSG00000245750ENST00000498938ENST00000558309ENST00000558633ENST00000558781ENST00000559025ENST00000559477ENSG00000259309ENST00000561316ENSG00000259496ENST00000560960ENSG00000259641ENST00000558411ENST00000558941ENST00000559212ENST00000560655CIL_0009BU_0002ENSMUSG00000032280ENSMUST00000034820ENSMUST00000159050ENSMUST00000159140ENSMUST00000159386ENSMUST00000159630ENSMUST00000160541ENSMUST00000160724ENSMUST00000160882ENSMUST00000161207ENSMUST00000161689ENSMUST00000162127ENSMUST00000162973ENSMUST00000178113ENSMUSG00000074256ENSMUST00000098658ENSMUST00000187131
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000140332 ENST00000317509 8.861±0.00 6.372±0.00 0.635±0.00 1.679±0.00 4.916±0.00 N/A 0.220±0.00 3.142±0.00 0.344±0.00 5.541±0.00 N/A 3.176±0.00 N/A 4.815±0.00
ENST00000440567 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.219±0.00 N/A 2.321±0.00 N/A N/A
ENST00000451782 N/A N/A 2.884±0.00 N/A 2.455±0.00 N/A N/A N/A 2.908±0.00 N/A N/A N/A 5.542±0.00 N/A
ENST00000537387 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539550 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542329 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557815 N/A N/A 0.527±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.828±0.00 N/A N/A
ENST00000557907 N/A N/A N/A N/A N/A 2.250±0.00 0.291±0.00 0.628±0.00 0.695±0.00 N/A 0.379±0.00 N/A N/A 4.896±0.00
ENST00000557919 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557984 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557997 6.930±0.00 8.075±0.00 N/A N/A 7.659±0.00 8.136±0.00 0.495±0.38 0.836±0.00 0.498±0.00 14.549±0.00 2.040±0.00 8.664±0.00 8.026±1.41 6.931±0.00
ENST00000558201 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558379 N/A N/A N/A N/A N/A N/A 0.166±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000558939 N/A N/A N/A N/A 1.511±0.00 1.403±0.00 N/A N/A N/A N/A N/A 1.484±0.00 N/A 3.436±0.00
ENST00000559048 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559191 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.734±0.00 N/A N/A N/A
ENST00000559574 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559608 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 24.385±0.00
ENST00000559826 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559929 N/A N/A N/A 3.918±0.00 3.753±0.00 N/A 0.232±0.00 N/A N/A N/A 1.683±0.00 N/A N/A N/A
ENST00000560525 N/A N/A N/A N/A N/A N/A 0.671±0.00 N/A N/A N/A N/A 7.181±2.90 14.212±0.00 6.210±0.00
ENST00000560589 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560939 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560996 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.785±0.00
ENST00000561453 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000215958 ENST00000401139 N/A 0.224±0.00 N/A N/A N/A N/A N/A 0.430±0.00 0.216±0.00 N/A N/A N/A N/A N/A
ENSG00000245750 ENST00000498938 N/A N/A N/A N/A 0.107±0.01 0.704±0.00 N/A 0.176±0.00 N/A N/A N/A 0.049±0.03 0.062±0.00 N/A
ENST00000558309 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.932±0.00 N/A 0.098±0.00 N/A N/A
ENST00000558633 N/A N/A N/A 0.179±0.00 N/A N/A 0.058±0.00 N/A N/A 0.060±0.00 N/A 0.101±0.00 N/A 0.184±0.00
ENST00000558781 N/A N/A N/A 0.107±0.00 N/A N/A N/A 0.631±0.00 N/A 0.205±0.00 N/A N/A N/A 0.662±0.00
ENST00000559025 N/A N/A N/A N/A N/A N/A N/A 0.986±0.00 N/A N/A N/A N/A N/A 0.146±0.00
ENST00000559029 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559477 0.023±0.00 N/A N/A N/A 0.063±0.00 0.193±0.00 0.074±0.04 2.254±0.00 0.098±0.06 0.155±0.00 N/A 0.127±0.04 0.053±0.02 0.763±0.58
ENST00000560882 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000259309 ENST00000561316 N/A 0.038±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.419±0.00
ENSG00000259496 ENST00000560960 N/A N/A N/A N/A N/A 0.024±0.00 N/A N/A N/A 0.673±0.00 N/A N/A N/A 0.023±0.00
ENSG00000259641 ENST00000558411 0.013±0.00 0.031±0.00 0.224±0.00 0.020±0.00 0.044±0.00 0.229±0.17 N/A 0.098±0.03 0.017±0.00 0.077±0.07 0.006±0.00 0.009±0.00 0.025±0.00 0.038±0.03
ENST00000558941 N/A 0.094±0.00 N/A N/A 0.196±0.00 N/A N/A N/A N/A 0.122±0.00 N/A 0.077±0.02 N/A N/A
ENST00000559212 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.077±0.00 N/A 0.200±0.00
ENST00000560655 N/A N/A N/A 0.077±0.00 N/A 0.139±0.00 N/A 0.076±0.00 N/A N/A N/A N/A N/A 0.134±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032280 ENSMUST00000034820 3.216±0.00 10.017±0.00 N/A N/A 2.674±0.00 N/A N/A 2.205±0.00 0.666±0.11 2.638±0.00 0.418±0.03 N/A 7.692±2.19 N/A
ENSMUST00000159050 8.989±0.96 19.675±5.10 N/A 10.402±1.54 12.460±3.10 8.112±2.21 1.417±0.12 5.098±1.10 1.393±0.33 7.019±2.17 0.577±0.00 12.744±1.57 N/A 25.419±2.26
ENSMUST00000159140 1.706±0.12 N/A N/A 2.016±0.00 1.105±0.41 N/A 0.288±0.00 N/A 0.318±0.00 N/A 0.145±0.05 N/A N/A N/A
ENSMUST00000159386 4.162±0.38 N/A N/A N/A 5.177±0.00 3.497±0.00 0.729±0.00 N/A N/A N/A 0.415±0.05 4.186±1.04 15.188±0.00 1.512±0.00
ENSMUST00000159630 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.273±0.00 N/A N/A N/A
ENSMUST00000160541 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 171.181±0.00 N/A
ENSMUST00000160724 N/A N/A N/A 16.383±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 74.320±0.00 71.931±0.00
ENSMUST00000160882 4.259±0.18 N/A N/A 2.490±0.00 4.914±1.04 N/A 1.269±0.38 N/A 0.878±0.03 3.011±0.00 0.457±0.06 5.449±2.04 15.324±1.98 N/A
ENSMUST00000161194 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161207 10.627±2.29 22.764±3.12 7.735±0.00 16.345±0.23 17.576±4.50 15.721±0.82 2.371±1.04 9.377±1.25 2.221±0.72 10.034±2.96 0.927±0.00 17.911±1.84 11.558±1.49 34.741±3.18
ENSMUST00000161689 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.047±0.95
ENSMUST00000161993 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162127 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.138±0.00
ENSMUST00000162281 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162583 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162962 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162973 N/A N/A 3.939±0.00 N/A N/A N/A N/A 3.995±0.00 0.529±0.00 N/A 0.335±0.13 7.606±0.00 11.478±0.00 N/A
ENSMUST00000178113 5.266±1.16 11.668±3.72 4.940±1.31 8.319±2.78 8.537±4.06 6.326±2.02 N/A 2.433±0.15 0.921±0.35 4.059±0.98 N/A 7.493±2.01 7.137±0.29 N/A
ENSMUSG00000074256 ENSMUST00000098658 N/A 0.146±0.00 0.027±0.00 0.021±0.01 0.049±0.00 0.108±0.00 N/A N/A 0.045±0.02 0.114±0.00 N/A 0.054±0.02 0.081±0.06 0.178±0.05
ENSMUST00000187131 0.297±0.05 0.117±0.06 0.084±0.00 0.034±0.02 0.150±0.09 0.054±0.00 0.041±0.00 0.058±0.01 0.051±0.01 0.072±0.03 0.164±0.00 0.202±0.09 0.079±0.01 1.580±0.13

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