C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RNA binding motif protein 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000035201 Rbm6-001 ENSMUSG00000032582 10090 - 9:107773559-107872724 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000035201
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000035201 1.778±0.63 0.650±0.00 2.795±0.22 5.370±0.00 1.824±0.39 1.613±0.43 0.724±0.08 1.304±0.48 1.980±0.78 2.090±0.50 1.099±0.28 5.219±4.62 7.261±3.21 5.835±5.95

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005634 IDA nucleus
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000266022 RBM6-001 protein_coding Homo_sapiens 0 4316
ENST00000419610 RBM6-002 nonsense_mediated_decay Homo_sapiens 0 2139
ENST00000421682 RBM6-019 protein_coding Homo_sapiens 0 435
ENST00000422955 RBM6-007 protein_coding Homo_sapiens 0 2235
ENST00000425608 RBM6-005 nonsense_mediated_decay Homo_sapiens 0 1958
ENST00000433811 RBM6-010 protein_coding Homo_sapiens 0 327
ENST00000434592 RBM6-008 nonsense_mediated_decay Homo_sapiens 0 1735
ENST00000438912 RBM6-017 protein_coding Homo_sapiens 0 549
ENST00000441115 RBM6-004 processed_transcript Homo_sapiens 0 1668
ENST00000442092 RBM6-006 protein_coding Homo_sapiens 0 2231
ENST00000443081 RBM6-009 protein_coding Homo_sapiens 0 4974
ENST00000446471 RBM6-014 protein_coding Homo_sapiens 0 464
ENST00000454079 RBM6-003 nonsense_mediated_decay Homo_sapiens 0 3705
ENST00000464013 RBM6-023 processed_transcript Homo_sapiens 0 320
ENST00000478026 RBM6-020 retained_intron Homo_sapiens 0 281
ENST00000483350 RBM6-016 retained_intron Homo_sapiens 0 652
ENST00000488807 RBM6-021 processed_transcript Homo_sapiens 0 368
ENST00000491874 RBM6-011 processed_transcript Homo_sapiens 0 364

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