C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RNA binding motif protein 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000425608 RBM6-005 ENSG00000004534 9606 + 3:49940151-50057853 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonHeartKidneyLiverLungOvaryENST00000425608
Transcript ID Bladder Breast Colon Heart Kidney Liver Lung Ovary
ENST00000425608 12.073±0.00 14.348±0.00 19.076±0.00 5.833±0.00 7.422±0.00 16.756±0.00 25.467±0.00 19.912±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000182301 Rbm6-007 retained_intron Mus_musculus 0 2098
ENSMUST00000183032 Rbm6-002 protein_coding Mus_musculus 0 2098
ENSMUST00000035201 Rbm6-001 protein_coding Mus_musculus 0 1958
ENSMUST00000186440 RP24-292B21.2-001 processed_pseudogene Mus_musculus 0 1555
ENSMUST00000186192 RP23-215C21.2-001 processed_pseudogene Mus_musculus 0 1110
ENSMUST00000183035 Rbm6-004 protein_coding Mus_musculus 0 254
ENSMUST00000183179 Rbm6-006 retained_intron Mus_musculus 0 235

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