C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: thioredoxin domain containing 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000035988 Txndc5-001 ENSMUSG00000038991 10090 - 13:38500273-38528490 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000035988
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000035988 72.549±37.87 219.865±13.62 62.881±4.96 17.629±3.44 82.656±41.27 222.259±18.38 18.365±2.68 47.815±11.74 49.691±10.73 93.957±15.18 10.280±1.23 159.941±56.39 78.598±19.61 8.118±2.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000161 CIL_000161_0003 CGP 13:38345716-38528824
CIL_00015W CIL_00015W_0003 CGP 13:38500273-38635109

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003756 IBA protein disulfide isomerase activity
GO:0005515 IEA protein binding
GO:0005788 IDA endoplasmic reticulum lumen
GO:0006457 IBA protein folding
GO:0034976 IBA response to endoplasmic reticulum stress
GO:0043277 IBA apoptotic cell clearance
GO:0045454 IEA cell redox homeostasis
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000145815 txndc5-001 protein_coding Danio_rerio 3.00018e-42 178
ENST00000379757 TXNDC5-001 protein_coding Homo_sapiens 0 1253
ENST00000439343 BLOC1S5-TXNDC5-001 nonsense_mediated_decay Homo_sapiens 0 1101
ENST00000460138 TXNDC5-002 retained_intron Homo_sapiens 0 431
ENST00000469459 TXNDC5-004 retained_intron Homo_sapiens 3.00018e-42 176
ENST00000473453 TXNDC5-003 protein_coding Homo_sapiens 0 1098
ENST00000475802 TXNDC5-005 retained_intron Homo_sapiens 0 424
ENST00000539054 BLOC1S5-TXNDC5-201 protein_coding Homo_sapiens 0 1101

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