C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: thioredoxin domain containing 5 (endoplasmic reticulum)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000379757 TXNDC5-001 ENSG00000239264 9606 - 6:7881517-7910814 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000379757
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000379757 45.619±0.00 174.138±0.00 5.603±0.00 12.222±0.00 60.889±10.43 45.169±0.03 12.500±7.60 40.277±19.56 52.243±39.73 42.713±22.36 4.033±1.07 74.273±33.53 100.669±8.45 26.702±15.65

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000161 CIL_000161_0002 CGP 6:7726797-8064364
CIL_00015W CIL_00015W_0002 CGP 6:7881517-8064414

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003756 IBA protein disulfide isomerase activity
GO:0005515 IPI protein binding
GO:0005783 IBA endoplasmic reticulum
GO:0005788 IEA endoplasmic reticulum lumen
GO:0006457 IBA protein folding
GO:0006892 TAS post-Golgi vesicle-mediated transport
GO:0016853 IEA isomerase activity
GO:0034976 IBA response to endoplasmic reticulum stress
GO:0043066 TAS negative regulation of apoptotic process
GO:0043202 TAS lysosomal lumen
GO:0043277 IBA apoptotic cell clearance
GO:0045454 IEA cell redox homeostasis
GO:0061024 TAS membrane organization
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000035988 Txndc5-001 protein_coding Mus_musculus 0 1253
ENSMUST00000162075 Txndc5-002 protein_coding Mus_musculus 0 1101
ENSMUST00000160653 Txndc5-003 protein_coding Mus_musculus 0 1099
ENSDART00000145815 txndc5-001 protein_coding Danio_rerio 0 222

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