| Transcript ID | Brain | Ovary | Placenta | Testis |
|---|---|---|---|---|
| ENSMUST00000036252 | 41.745±0.00 | 47.585±29.98 | 89.660±11.21 | 8.778±6.80 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | lamin A | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000036252  |
Lmna-003 |
ENSMUSG00000028063 |
10090 | - |
3:88483206-88493312  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008P5 | CIL_0008P5_0002 | VISTA | 3:88218217-88823366 |
| CIL_000898 | CIL_000898_0002 | VISTA | 3:88224783-88827970 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005198 | IEA | structural molecule activity |
| GO:0005515 | IPI | protein binding |
| GO:0005634 | IDA | nucleus |
| GO:0005635 | IDA | nuclear envelope |
| GO:0005638 | IDA | lamin filament |
| GO:0006997 | IMP | nucleus organization |
| GO:0006998 | IGI | nuclear envelope organization |
| GO:0007517 | ISS | muscle organ development |
| GO:0030010 | NAS | establishment of cell polarity |
| GO:0030334 | IMP | regulation of cell migration |
| GO:0030951 | IMP | establishment or maintenance of microtubule cytoskeleton polarity |
| GO:0034504 | IMP | protein localization to nucleus |
| GO:0035105 | IMP | sterol regulatory element binding protein import into nucleus |
| GO:0048471 | ISS | perinuclear region of cytoplasm |
| GO:0055015 | IMP | ventricular cardiac muscle cell development |
| GO:0071456 | ISS | cellular response to hypoxia |
| GO:0090201 | IMP | negative regulation of release of cytochrome c from mitochondria |
| GO:0090343 | ISS | positive regulation of cell aging |
| GO:1900180 | IMP | regulation of protein localization to nucleus |
| GO:2001237 | IMP | negative regulation of extrinsic apoptotic signaling pathway |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000347559
|
LMNA-201 | protein_coding | Homo_sapiens | 0 | 1598 |
|
ENST00000361308
|
LMNA-202 | protein_coding | Homo_sapiens | 0 | 1236 |
|
ENST00000368297
|
LMNA-007 | protein_coding | Homo_sapiens | 0 | 1768 |
|
ENST00000368298
|
LMNA-018 | retained_intron | Homo_sapiens | 0 | 760 |
|
ENST00000368299
|
LMNA-004 | protein_coding | Homo_sapiens | 0 | 1687 |
|
ENST00000368300
|
LMNA-001 | protein_coding | Homo_sapiens | 0 | 1687 |
|
ENST00000368301
|
LMNA-002 | protein_coding | Homo_sapiens | 0 | 1772 |
|
ENST00000448611
|
LMNA-017 | protein_coding | Homo_sapiens | 0 | 1703 |
|
ENST00000459904
|
LMNA-015 | processed_transcript | Homo_sapiens | 0 | 305 |
|
ENST00000469565
|
LMNA-025 | processed_transcript | Homo_sapiens | 0 | 237 |
|
ENST00000470199
|
LMNA-023 | processed_transcript | Homo_sapiens | 0 | 243 |
|
ENST00000473598
|
LMNA-006 | protein_coding | Homo_sapiens | 0 | 1685 |
|
ENST00000496738
|
LMNA-005 | processed_transcript | Homo_sapiens | 0 | 710 |
|
ENST00000498722
|
LMNA-019 | retained_intron | Homo_sapiens | 0 | 1046 |
|
ENST00000502357
|
LMNA-026 | processed_transcript | Homo_sapiens | 0 | 337 |
|
ENST00000502751
|
LMNA-021 | processed_transcript | Homo_sapiens | 0 | 291 |
|
ENST00000504687
|
LMNA-028 | protein_coding | Homo_sapiens | 0 | 534 |
|
ENST00000506981
|
LMNA-030 | retained_intron | Homo_sapiens | 8e-17 | 92 |
|
ENST00000508500
|
LMNA-020 | protein_coding | Homo_sapiens | 0 | 612 |
|
ENST00000515459
|
LMNA-027 | nonsense_mediated_decay | Homo_sapiens | 0 | 614 |
|
ENST00000515824
|
LMNA-029 | retained_intron | Homo_sapiens | 0 | 394 |
