C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: praja ring finger 1, E3 ubiquitin protein ligase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000036354 Pja1-002 ENSMUSG00000034403 10090 - X:99466114-99470692 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000036354
Transcript ID Adipose Bladder Breast Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000036354 2.756±0.25 3.809±0.64 1.078±0.00 2.626±0.10 2.346±0.44 2.739±0.00 0.726±0.22 11.572±4.05 6.745±3.21 7.919±2.38

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001TA CIL_0001TA_0002 CGP X:99136130-99471273
CIL_0002RH CIL_0002RH_0002 CGP X:99465734-99848790

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0008270 IEA zinc ion binding
GO:0016567 IDA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0030163 IDA protein catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000361478 PJA1-001 protein_coding Homo_sapiens 0 990
ENST00000374571 PJA1-006 protein_coding Homo_sapiens 0 950
ENST00000374583 PJA1-005 protein_coding Homo_sapiens 0 992
ENST00000374584 PJA1-002 protein_coding Homo_sapiens 0 992
ENST00000477231 PJA1-004 processed_transcript Homo_sapiens 0 507
ENST00000590146 PJA1-007 protein_coding Homo_sapiens 0 427

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