C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Fanconi anemia, complementation group I
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000036865 Fanci-201 ENSMUSG00000039187 10090 + 7:79392338-79450264 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverOvaryPlacentaTestisENSMUST00000036865
Transcript ID Brain Liver Ovary Placenta Testis
ENSMUST00000036865 2.225±0.00 5.883±0.76 1.803±0.25 4.412±0.25 3.947±0.52

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00011C CIL_00011C_0002 CGP 7:79374871-79450265
CIL_0002RC CIL_0002RC_0003 CGP 7:79391929-79466362

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0006281 IEA DNA repair
GO:0007049 IEA cell cycle
GO:0016020 IEA membrane
GO:0031398 IEA positive regulation of protein ubiquitination
GO:0070182 IEA DNA polymerase binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000268124 POLG-001 protein_coding Homo_sapiens 0 302
ENST00000300027 FANCI-001 protein_coding Homo_sapiens 0 2239
ENST00000310775 FANCI-002 protein_coding Homo_sapiens 0 3884
ENST00000442287 POLG-002 protein_coding Homo_sapiens 0 302
ENST00000447611 FANCI-004 nonsense_mediated_decay Homo_sapiens 0 2239
ENST00000526671 POLG-010 retained_intron Homo_sapiens 0 259
ENST00000530292 POLG-009 nonsense_mediated_decay Homo_sapiens 0 302
ENST00000561894 FANCI-005 protein_coding Homo_sapiens 0 1760
ENST00000563250 FANCI-012 protein_coding Homo_sapiens 0 588
ENST00000564350 FANCI-016 retained_intron Homo_sapiens 0 272
ENST00000565255 FANCI-008 protein_coding Homo_sapiens 0 628
ENST00000566895 FANCI-006 retained_intron Homo_sapiens 0 2390
ENST00000567891 FANCI-007 protein_coding Homo_sapiens 0 459
ENST00000567996 FANCI-003 protein_coding Homo_sapiens 0 713
ENST00000570225 FANCI-017 protein_coding Homo_sapiens 0 351

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