C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002RC_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000026224-ENSDARG00000060951 CGP 7955 25:8655592-8721282
GeneTranscriptPositionBiotype
ENSDARG00000026224 (fanci)
Fanconi anemia, complementation group I 		ENSDART00000020998 (fanci-201) 8657957-8686381 protein_coding
ENSDART00000103145 (fanci-202) 8657966-8680405 protein_coding
ENSDART00000136530 (fanci-002) 8655645-8686251 processed_transcript
ENSDART00000142090 (fanci-001) 8655592-8687198 protein_coding
ENSDARG00000060951 (polg)
polymerase (DNA directed), gamma 		ENSDART00000086397 (polg-201) 8686925-8719783 protein_coding
ENSDART00000149040 (polg-002) 8705247-8708799 retained_intron
ENSDART00000150129 (polg-001) 8686513-8721282 protein_coding
CIL_0002RC_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000140525-ENSG00000140521 CGP 9606 15:89243949-89334861
GeneTranscriptPositionBiotype
ENSG00000140521 (POLG)
polymerase (DNA directed), gamma 		ENST00000268124 (POLG-001) 89316303-89334847 protein_coding
ENST00000442287 (POLG-002) 89316320-89334861 protein_coding
ENST00000525806 (POLG-011) 89332329-89333244 processed_transcript
ENST00000526314 (POLG-013) 89322742-89326691 protein_coding
ENST00000526398 (POLG-005) 89322805-89325587 nonsense_mediated_decay
ENST00000526573 (POLG-006) 89323514-89325484 retained_intron
ENST00000526671 (POLG-010) 89316517-89317828 retained_intron
ENST00000528881 (POLG-012) 89320820-89323437 nonsense_mediated_decay
ENST00000530292 (POLG-009) 89316339-89320830 nonsense_mediated_decay
ENST00000530715 (POLG-008) 89319268-89323427 nonsense_mediated_decay
ENST00000532363 (POLG-003) 89327013-89328698 retained_intron
ENST00000532584 (POLG-004) 89321775-89325600 retained_intron
ENST00000533857 (POLG-007) 89323520-89324291 retained_intron
ENSG00000275101 (MIR6766)
microRNA 6766 		ENST00000622641 (MIR6766-201) 89326739-89326810 miRNA
CIL_0002RC_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000039187-ENSMUSG00000039176 CGP 10090 7:79391929-79466362
GeneTranscriptPositionBiotype
ENSMUSG00000039176 (Polg)
polymerase (DNA directed), gamma 		ENSMUST00000073889 (Polg-001) 79448791-79466362 protein_coding
ENSMUST00000125562 (Polg-005) 79464895-79466070 processed_transcript
ENSMUST00000127082 (Polg-003) 79449382-79466187 retained_intron
ENSMUST00000127734 (Polg-011) 79454532-79455394 retained_intron
ENSMUST00000132048 (Polg-009) 79454135-79459297 processed_transcript
ENSMUST00000139290 (Polg-014) 79449387-79450648 processed_transcript
ENSMUST00000139597 (Polg-010) 79454038-79456065 retained_intron
ENSMUST00000139668 (Polg-008) 79455486-79459302 protein_coding
ENSMUST00000139795 (Polg-012) 79451930-79454340 retained_intron
ENSMUST00000142915 (Polg-006) 79460270-79461903 retained_intron
ENSMUST00000143672 (Polg-007) 79456070-79459794 protein_coding
ENSMUST00000145154 (Polg-013) 79450169-79452080 retained_intron
ENSMUST00000149444 (Polg-002) 79449563-79466180 nonsense_mediated_decay
ENSMUST00000154403 (Polg-004) 79449382-79455080 retained_intron
ENSMUSG00000039187 (Fanci)
Fanconi anemia, complementation group I 		ENSMUST00000036865 (Fanci-201) 79392338-79450264 protein_coding
ENSMUST00000117227 (Fanci-001) 79392317-79450265 protein_coding
ENSMUST00000118959 (Fanci-002) 79392324-79409582 protein_coding
ENSMUST00000126456 (Fanci-005) 79391929-79401886 protein_coding
ENSMUST00000132091 (Fanci-004) 79392353-79450264 nonsense_mediated_decay
ENSMUST00000137667 (Fanci-003) 79399136-79435691 protein_coding
ENSMUSG00000082400 (Gm16017)
predicted gene 16017 		ENSMUST00000119834 (Gm16017-001) 79412310-79412517 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002RC_0001ENSDARG00000026224ENSDART00000020998ENSDART00000103145ENSDART00000136530ENSDART00000142090ENSDARG00000060951ENSDART00000086397ENSDART00000149040ENSDART00000150129CIL_0002RC_0002ENSG00000140521ENST00000268124ENST00000442287ENST00000525806ENST00000526314ENST00000526398ENST00000526573ENST00000526671ENST00000528881ENST00000530292ENST00000530715ENST00000532363ENST00000532584ENST00000533857ENSG00000275101ENST00000622641CIL_0002RC_0003ENSMUSG00000039176ENSMUST00000073889ENSMUST00000125562ENSMUST00000127082ENSMUST00000127734ENSMUST00000132048ENSMUST00000139290ENSMUST00000139597ENSMUST00000139668ENSMUST00000139795ENSMUST00000142915ENSMUST00000143672ENSMUST00000145154ENSMUST00000149444ENSMUST00000154403ENSMUSG00000039187ENSMUST00000036865ENSMUST00000117227ENSMUST00000118959ENSMUST00000126456ENSMUST00000132091ENSMUST00000137667ENSMUSG00000082400ENSMUST00000119834
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002RC_0001ENSDARG00000026224ENSDART00000020998ENSDART00000103145ENSDART00000142090ENSDARG00000060951ENSDART00000086397ENSDART00000150129CIL_0002RC_0002ENSG00000140521ENST00000268124ENST00000442287ENST00000526398ENST00000530292ENSG00000275101ENST00000622641CIL_0002RC_0003ENSMUSG00000039176ENSMUST00000073889ENSMUST00000127082ENSMUST00000139795ENSMUST00000149444ENSMUST00000154403ENSMUSG00000039187ENSMUST00000036865ENSMUSG00000082400ENSMUST00000119834
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000026224 ENSDART00000020998 N/A N/A N/A N/A N/A N/A N/A 0.979±0.00 0.102±0.00 N/A 0.106±0.00 N/A N/A N/A
ENSDART00000103145 N/A N/A N/A 0.792±0.00 N/A N/A N/A N/A 0.137±0.00 N/A N/A N/A N/A N/A
ENSDART00000136530 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000142090 N/A N/A N/A N/A N/A N/A 0.197±0.00 2.766±1.78 N/A N/A N/A N/A N/A N/A
ENSDARG00000060951 ENSDART00000086397 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.115±0.00 N/A N/A N/A
ENSDART00000149040 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000150129 N/A N/A N/A 3.322±0.15 N/A N/A 1.402±0.23 1.509±0.00 0.159±0.00 N/A 0.372±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000140521 ENST00000268124 N/A N/A N/A 1.546±0.57 N/A N/A N/A N/A 1.898±0.34 4.175±3.03 7.148±0.00 4.850±0.64 3.621±0.00 N/A
ENST00000442287 11.887±0.00 11.540±0.00 N/A 5.772±0.00 4.465±2.42 5.811±4.14 9.991±0.00 10.963±0.00 2.413±0.00 4.304±0.00 4.446±0.00 5.598±1.49 7.950±2.68 5.484±0.00
ENST00000525806 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526314 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526398 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.998±0.00 N/A N/A N/A
ENST00000526573 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526671 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528881 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530292 10.503±0.00 20.751±0.00 N/A 7.318±0.00 N/A 9.299±0.00 N/A 10.135±0.00 4.539±0.00 N/A N/A 19.771±11.02 16.589±0.00 16.028±0.00
ENST00000530715 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532363 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532584 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533857 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000275101 ENST00000622641 N/A 0.924±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000039176 ENSMUST00000073889 4.662±1.25 5.366±1.65 5.068±0.86 4.960±0.27 8.007±4.03 9.082±3.38 3.683±0.70 4.546±1.16 4.639±1.90 7.128±3.30 1.318±0.31 13.490±5.45 13.577±4.11 4.591±0.33
ENSMUST00000125562 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127082 3.842±0.56 12.996±1.54 3.346±0.29 3.490±0.13 7.670±2.40 10.182±1.42 2.290±0.30 3.426±0.89 5.169±1.44 7.008±0.22 2.963±0.60 7.862±3.05 17.472±10.74 8.037±0.44
ENSMUST00000127734 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132048 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139290 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139597 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139668 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139795 N/A N/A N/A 27.167±0.00 N/A N/A N/A N/A N/A N/A N/A 27.497±0.00 N/A 54.652±0.00
ENSMUST00000142915 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143672 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145154 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149444 5.139±1.82 N/A 2.951±0.55 5.859±4.24 5.764±1.17 N/A 4.463±0.37 3.560±0.52 3.273±0.71 3.618±0.00 2.940±0.52 7.702±3.47 19.872±10.18 12.311±5.75
ENSMUST00000154403 6.733±0.81 N/A 5.148±0.68 N/A 6.081±0.35 8.448±0.00 3.479±0.00 3.996±0.00 N/A 9.203±0.00 N/A 8.752±2.24 31.971±17.15 N/A
ENSMUSG00000039187 ENSMUST00000036865 N/A N/A N/A 2.225±0.00 N/A N/A N/A N/A 5.883±0.76 N/A N/A 1.803±0.25 4.412±0.25 3.947±0.52
ENSMUST00000117227 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000118959 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126456 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132091 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137667 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000082400 ENSMUST00000119834 N/A N/A N/A N/A N/A N/A N/A N/A 0.308±0.00 N/A N/A N/A N/A N/A

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