C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: polymerase (DNA directed), gamma
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000530292 POLG-009 ENSG00000140521 9606 - 15:89316339-89320830 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonKidneyLiverOvaryPlacentaTestisENST00000530292
Transcript ID Adipose Adrenal Brain Colon Kidney Liver Ovary Placenta Testis
ENST00000530292 10.503±0.00 20.751±0.00 7.318±0.00 9.299±0.00 10.135±0.00 4.539±0.00 19.771±11.02 16.589±0.00 16.028±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00011C CIL_00011C_0001 CGP 15:89209869-89317261
CIL_0002RC CIL_0002RC_0002 CGP 15:89243949-89334861
CIL_0002R9 CIL_0002R9_0002 CGP 15:89316303-89496613

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003887 IEA DNA-directed DNA polymerase activity
GO:0005760 IEA gamma DNA polymerase complex
GO:0006260 IEA DNA replication
GO:0071897 IEA DNA biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000149444 Polg-002 nonsense_mediated_decay Mus_musculus 0 636
ENSMUST00000073889 Polg-001 protein_coding Mus_musculus 0 636
ENSMUST00000127082 Polg-003 retained_intron Mus_musculus 0 553
ENSMUST00000154403 Polg-004 retained_intron Mus_musculus 0 553
ENSMUST00000145154 Polg-013 retained_intron Mus_musculus 0 483
ENSMUST00000036865 Fanci-201 protein_coding Mus_musculus 0 302
ENSMUST00000132091 Fanci-004 nonsense_mediated_decay Mus_musculus 0 302
ENSMUST00000117227 Fanci-001 protein_coding Mus_musculus 0 302
ENSMUST00000139290 Polg-014 processed_transcript Mus_musculus 0 243
ENSMUST00000139795 Polg-012 retained_intron Mus_musculus 2e-36 158

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