C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cyclin-dependent kinase inhibitor 1C (P57)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000037287 Cdkn1c-201 ENSMUSG00000037664 10090 - 7:143458350-143461050 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000037287
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000037287 5.894±1.47 180.012±30.48 3.973±0.87 33.206±16.64 7.514±2.23 3.471±0.71 2.503±0.51 6.021±2.64 24.390±24.63 5.864±0.57 4.704±0.75 5.561±2.11 415.908±208.45 2.107±0.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008A3 CIL_0008A3_0002 VISTA 7:142895498-143499796
CIL_0003FM CIL_0003FM_0003 CGP 7:143106362-143461050

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IGI negative regulation of transcription from RNA polymerase II promoter
GO:0001501 IMP skeletal system development
GO:0001822 IMP kidney development
GO:0001890 IMP placenta development
GO:0004861 IEA cyclin-dependent protein serine/threonine kinase inhibitor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0007050 IEA cell cycle arrest
GO:0007568 IMP aging
GO:0030099 IGI myeloid cell differentiation
GO:0030325 IMP adrenal gland development
GO:0035264 IMP multicellular organism growth
GO:0042326 IDA negative regulation of phosphorylation
GO:0042551 IMP neuron maturation
GO:0043010 IMP camera-type eye development
GO:0055123 IMP digestive system development
GO:0060065 IMP uterus development
GO:0060669 IMP embryonic placenta morphogenesis
GO:0071514 IMP genetic imprinting
GO:0071901 IEA negative regulation of protein serine/threonine kinase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000313407 CDKN1C-201 protein_coding Homo_sapiens 0 429
ENST00000380725 CDKN1C-002 protein_coding Homo_sapiens 0 305
ENST00000414822 CDKN1C-001 protein_coding Homo_sapiens 0 357
ENST00000430149 CDKN1C-006 protein_coding Homo_sapiens 0 357
ENST00000440480 CDKN1C-003 protein_coding Homo_sapiens 0 484
ENST00000616138 CDKN1C-202 protein_coding Homo_sapiens 0 357

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