C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CLOCK interacting protein, circadian
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000038369 Cipc-201 ENSMUSG00000034157 10090 + 12:86947343-86965362 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000038369
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000038369 4.557±1.30 5.235±1.87 21.517±0.08 14.208±6.24 5.468±0.97 13.394±2.77 4.778±0.90 6.236±2.02 4.261±1.53 6.722±2.91 9.502±1.13 6.936±3.06 2.223±1.27 12.055±1.49

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VF CIL_0007VF_0002 VISTA 12:86500572-87103602
CIL_0008WP CIL_0008WP_0002 VISTA 12:86510598-87113301
CIL_000867 CIL_000867_0002 VISTA 12:86515545-87117582
CIL_0007VT CIL_0007VT_0002 VISTA 12:86594665-87199694
CIL_0003P0 CIL_0003P0_0002 CGP 12:86880703-86965362
CIL_00071S CIL_00071S_0002 CGP 12:86947043-86988676

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000361786 CIPC-001 protein_coding Homo_sapiens 0 1432
ENST00000554447 CIPC-007 protein_coding Homo_sapiens 0 488
ENST00000554658 CIPC-005 protein_coding Homo_sapiens 0 433
ENST00000555200 CIPC-008 protein_coding Homo_sapiens 0 455
ENST00000555437 CIPC-002 protein_coding Homo_sapiens 0 198
ENST00000555611 CIPC-004 protein_coding Homo_sapiens 9.99995e-41 171
ENST00000557115 CIPC-006 protein_coding Homo_sapiens 0 516

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