C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: thioredoxin domain containing 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000038424 Txndc11-001 ENSMUSG00000022498 10090 - 16:11074911-11134650 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000038424
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000038424 10.016±1.49 9.530±3.75 6.390±1.57 10.843±2.60 15.630±5.22 4.492±0.25 10.956±0.92 8.389±2.34 9.831±2.98 1.264±0.73 15.745±4.78 18.060±5.13 3.922±0.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007HQ CIL_0007HQ_0003 CGP 16:10959275-11074983
CIL_00059Z CIL_00059Z_0002 CGP 16:11066298-11134650
CIL_0007DU CIL_0007DU_0002 CGP 16:11074911-11176393

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003756 IBA protein disulfide isomerase activity
GO:0005515 IEA protein binding
GO:0005783 IBA endoplasmic reticulum
GO:0006457 IBA protein folding
GO:0016021 IEA integral component of membrane
GO:0034976 IBA response to endoplasmic reticulum stress
GO:0045454 IEA cell redox homeostasis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000283033 TXNDC11-001 protein_coding Homo_sapiens 0 2811
ENST00000329565 SNN-001 protein_coding Homo_sapiens 1e-26 126
ENST00000356957 TXNDC11-002 protein_coding Homo_sapiens 0 1784
ENST00000570917 TXNDC11-006 processed_transcript Homo_sapiens 0 656
ENST00000571882 TXNDC11-010 nonsense_mediated_decay Homo_sapiens 0 451
ENST00000572732 TXNDC11-004 retained_intron Homo_sapiens 0 732
ENST00000573174 TXNDC11-007 processed_transcript Homo_sapiens 0 680
ENST00000575349 TXNDC11-011 retained_intron Homo_sapiens 0 294
ENST00000575591 TXNDC11-009 protein_coding Homo_sapiens 0 658
ENST00000576969 TXNDC11-008 nonsense_mediated_decay Homo_sapiens 0 638

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