C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: thioredoxin domain containing 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000283033 TXNDC11-001 ENSG00000153066 9606 - 16:11679080-11742878 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000283033
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000283033 9.944±0.00 13.461±0.00 2.425±0.00 5.720±3.21 2.267±0.00 5.769±0.00 11.352±2.79 2.933±0.00 12.114±4.42 6.110±4.85 6.202±5.30 11.093±1.63 5.342±3.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007HQ CIL_0007HQ_0002 CGP 16:11547722-11679159
CIL_00059Z CIL_00059Z_0001 CGP 16:11668414-11742878
CIL_0007DU CIL_0007DU_0001 CGP 16:11679080-11797267

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003756 IBA protein disulfide isomerase activity
GO:0005515 IPI protein binding
GO:0005783 IBA endoplasmic reticulum
GO:0006457 IBA protein folding
GO:0016021 IEA integral component of membrane
GO:0034976 IBA response to endoplasmic reticulum stress
GO:0045454 IEA cell redox homeostasis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000038424 Txndc11-001 protein_coding Mus_musculus 0 2811
ENSMUST00000118362 Txndc11-002 protein_coding Mus_musculus 0 2122
ENSMUST00000145225 Txndc11-006 nonsense_mediated_decay Mus_musculus 0 992
ENSMUST00000147884 Txndc11-004 nonsense_mediated_decay Mus_musculus 0 889
ENSMUST00000118679 Txndc11-003 protein_coding Mus_musculus 0 869
ENSMUST00000131012 Txndc11-005 processed_transcript Mus_musculus 0 636
ENSMUST00000155221 Txndc11-009 nonsense_mediated_decay Mus_musculus 0 407
ENSMUST00000148183 Txndc11-008 retained_intron Mus_musculus 0 366
ENSMUST00000089011 Snn-201 protein_coding Mus_musculus 3e-22 111

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