C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transformation/transcription domain-associated protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000038980 Trrap-006 ENSMUSG00000045482 10090 + 5:144771089-144859751 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonMuscleOvaryPlacentaTestisENSMUST00000038980
Transcript ID Colon Muscle Ovary Placenta Testis
ENSMUST00000038980 1.579±0.00 0.571±0.18 6.528±2.35 8.025±0.00 1.149±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004TO CIL_0004TO_0002 CGP 5:144735915-144859778
CIL_0004TP CIL_0004TP_0002 CGP 5:144768092-144965847

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000123 TAS histone acetyltransferase complex
GO:0003713 IDA transcription coactivator activity
GO:0005667 IDA transcription factor complex
GO:0006355 IDA regulation of transcription, DNA-templated
GO:0007093 IMP mitotic cell cycle checkpoint
GO:0008152 IEA metabolic process
GO:0016773 IEA phosphotransferase activity, alcohol group as acceptor

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000122245 trrap-201 protein_coding Danio_rerio 0 3000
ENSDART00000152394 trrap-001 protein_coding Danio_rerio 0 1892
ENST00000355540 TRRAP-002 protein_coding Homo_sapiens 0 13520
ENST00000359863 TRRAP-001 protein_coding Homo_sapiens 0 5312
ENST00000417523 TRRAP-005 protein_coding Homo_sapiens 0 307
ENST00000446306 TRRAP-004 protein_coding Homo_sapiens 0 11550
ENST00000456197 TRRAP-003 protein_coding Homo_sapiens 0 6329
ENST00000480695 TRRAP-006 retained_intron Homo_sapiens 0 689

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