C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transformation/transcription domain-associated protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000456197 TRRAP-003 ENSG00000196367 9606 + 7:98900680-99013243 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000456197
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000456197 2.220±0.00 3.940±0.00 1.199±0.00 1.194±0.72 2.219±0.47 1.565±0.00 1.095±0.85 1.908±0.69 1.295±0.00 2.000±0.00 1.580±0.00 3.496±0.71 2.457±1.01 5.849±1.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004TO CIL_0004TO_0001 CGP 7:98846488-99013243
CIL_0004TP CIL_0004TP_0001 CGP 7:98877933-99144100

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005488 IEA binding
GO:0005515 IEA protein binding
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups
GO:0016773 IEA phosphotransferase activity, alcohol group as acceptor

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000132925 Trrap-004 protein_coding Mus_musculus 0 12650
ENSMUST00000094120 Trrap-005 protein_coding Mus_musculus 0 9413
ENSMUST00000100467 Trrap-001 protein_coding Mus_musculus 0 8410
ENSMUST00000038980 Trrap-006 protein_coding Mus_musculus 0 6329
ENSMUST00000132347 Trrap-003 retained_intron Mus_musculus 0 4673
ENSDART00000152394 trrap-001 protein_coding Danio_rerio 0 3308
ENSDART00000122245 trrap-201 protein_coding Danio_rerio 0 2926
ENSMUST00000124909 Trrap-009 retained_intron Mus_musculus 0 363
ENSMUST00000136379 Trrap-002 retained_intron Mus_musculus 0 281

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