C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: golgi autoantigen, golgin subfamily a, 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000039165 Golga1-001 ENSMUSG00000026754 10090 - 2:39016261-39065541 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000039165
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000039165 1.518±0.56 2.297±0.09 2.703±0.75 3.324±0.12 1.115±0.38 2.491±0.69 1.001±0.29 1.245±0.36 1.160±0.36 1.205±0.30 1.105±0.37 2.351±0.67 1.559±0.50 2.512±0.80

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002C7 CIL_0002C7_0003 CGP 2:39008076-39065541
CIL_00075F CIL_00075F_0002 CGP 2:39016261-39190730

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000042 IEA protein targeting to Golgi
GO:0005515 IPI protein binding
GO:0005794 IDA Golgi apparatus
GO:0005802 IDA trans-Golgi network
GO:0008150 ND biological_process
GO:0016020 IEA membrane
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0048471 IDA perinuclear region of cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000373555 GOLGA1-001 protein_coding Homo_sapiens 0 1666
ENST00000421514 GOLGA1-005 protein_coding Homo_sapiens 0 536
ENST00000475407 GOLGA1-003 nonsense_mediated_decay Homo_sapiens 0 773
ENST00000485337 GOLGA1-002 nonsense_mediated_decay Homo_sapiens 0 353

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