C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tubby like protein 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000039655 Tulp4-001 ENSMUSG00000034377 10090 + 17:6138148-6240628 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000039655
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000039655 2.275±0.31 13.172±9.50 11.857±7.10 1.895±0.00 2.831±0.41 1.815±0.00 3.102±0.50 0.687±0.58 4.097±0.00 8.687±0.39 3.615±2.12 3.130±1.09 12.924±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004W3 CIL_0004W3_0002 CGP 17:6079786-6251128
CIL_0002QL CIL_0002QL_0003 CGP 17:6106437-6305783

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005737 ISA cytoplasm
GO:0008150 ND biological_process
GO:0016567 IEA protein ubiquitination
GO:0035556 IEA intracellular signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000091818 tulp4b-201 protein_coding Danio_rerio 0 363
ENSDART00000155957 tulp4b-001 protein_coding Danio_rerio 0 363
ENST00000367094 TULP4-002 protein_coding Homo_sapiens 0 2950
ENST00000367097 TULP4-001 protein_coding Homo_sapiens 0 5782
ENST00000613390 TULP4-004 nonsense_mediated_decay Homo_sapiens 0 616
ENST00000616856 TULP4-003 retained_intron Homo_sapiens 0 2113

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