C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RNA binding motif protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000040010 Rbm3-005 ENSMUSG00000031167 10090 - X:8138978-8145697 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverOvaryPlacentaENSMUST00000040010
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Ovary Placenta
ENSMUST00000040010 8.960±0.00 12.259±0.00 4.523±0.00 4.456±0.00 1.130±0.12 2.273±0.40 10.328±6.91 7.191±0.97 4.626±2.76

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005515 IEA protein binding
GO:0006412 IDA translation
GO:0009409 IDA response to cold
GO:0035196 IDA production of miRNAs involved in gene silencing by miRNA
GO:0043023 IPI ribosomal large subunit binding
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000354480 RBM3-004 protein_coding Homo_sapiens 0 294
ENST00000376755 RBM3-005 protein_coding Homo_sapiens 0 560
ENST00000376759 RBM3-003 protein_coding Homo_sapiens 0 579
ENST00000466764 RBM3-009 processed_transcript Homo_sapiens 0 292
ENST00000489344 RBM3-001 processed_transcript Homo_sapiens 0 294

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